Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2019 ATGGGAATGGAGGGAGGATTACAAGTTTGGGATTTCATCAAACAAGTATGTGTTGGGCGATGGTTCTCTGTATTCGCATCGCTTTTGATGATGATGGGAACCGGAACCACTTACATATATGGAACCTACTCAAAAGTGATAAAGACCCAATTTAATTACACCCAAACTCAAATTAACACTTTGGGATTTGCAAAGGATCTGGGGTCTAATTGGGGAATTTTTGCAGGGCTTCTAGCGGAGGTGGCTCCATCCCCTGTTTTGTTATTCATCTCTGCATTCCTCAACTTTTCATGCTTTTTCACTATTTGGTTGTCCATAACCCATCGCATCGCCAAGCCCCAATTCTGGCAAATGTTCCTTTATATTTGCATTGGTACAAACTCTTCCAATTTCGCCAACACCGCCATTCTAGTGAACGGCGTTAGAAACTTTCCAGACCGACGAGGCGTTATTTTGGGGCTTCTGAAAGGATTTGTTGGGATTGGAGGTGCGGTTTTAACCCAACTTTATCTGGCGTTCTATGGGCACGATGATCCATCTGATCAAGTTCTTCTCTTCTCTTGGCTCCCATCTGTGTTAATCCTCATCCTTTTCAGCTCAATTCGACCCATCAACAGTCGTAAGCACCCAGAAGAGCTAAAAGTATTCTACCACTTGCTTTATATCTCCATACTTCTTGCCCTCTTTATCTTGTTTCTGACCATTGCACAAAAGCAAGCCTCTTTCTCTCACGCTGGCTACGTTAGTGGAGCATGTGTCATTATTGTCATGTTATGTTTACCACTTCTCATTGCATTTAGAGAAGAATTCTTTCTCTACAAACTCAACCTCCAAAACAAAAACAAACACCCTTCTAACTCATCATCTGTCACAGTTTCCATTATTCTCGAACAACAACAACTTGCCTCAAAGGAAACTACGCCGCCCACTTCCAACACCTGGTTATCGAAAATAATGAACAAGCCTGCAAGAGGGGAGGATTTCACCATCTTACAAGCTATGTTTAGCAAGGATATGGCCCTTATTTGCTTAGCTACTTTTTCTGGATGTGGGTCCTCTCTGGCAGCAATTGATAATTTGGGCCAAATTGGGGAATCCCTTCACTATCCGCCCAAAGCCATAAGCATATTCGTTTCTTGGGTATCTATCTTCAGTTTCTTCGGTCGAGTGTGCTCCGGTTTCATCTCTGACACCCTCATGGTCAAATATAAATTACCTCGCCCTCTCATATTTGCATTCGCTTTTCTCATCACTTCCATCGGCCAACTCTGCATTGTGTATCCAATCCGCGGATCAGTGTACGCGGCTTCCTTGATAATCGGGTTTGGGTTTGGATCACAAGTGCCATTACTGTTTGCCGTAATCTCAGAGTTGTTCGGGCTGAAGCACTACTCCACGTTGTTCAATTGGGGGCAACTCATAGTTCCGTTAGGATCATATATATTAAACGTTGAAGTAGTGGGAAAATTGTACGATTTGGAAGTTTCAAGAGAACACAATGGTGTCAGTGGGAAGGTGCTCGCTTGTAAAGGAGCTCATTGCTTTAGTGGCTCATTCACCATTTTGGCTATATCCACATTGTTTGGCGCTCTCAGTATGCTGGTGTTAGCTTATAGGACTAGAGAATTTTATAGAGGCGATGTGTACAACAAATACAAAGAGGATTTGTGGATTCAACCAACTGAAATGGAGTTTTATTGTCTAGATAAAAAGAAGGACGTCACCGACTACTAA 1734 42.73 MGMEGGLQVWDFIKQVCVGRWFSVFASLLMMMGTGTTYIYGTYSKVIKTQFNYTQTQINTLGFAKDLGSNWGIFAGLLAEVAPSPVLLFISAFLNFSCFFTIWLSITHRIAKPQFWQMFLYICIGTNSSNFANTAILVNGVRNFPDRRGVILGLLKGFVGIGGAVLTQLYLAFYGHDDPSDQVLLFSWLPSVLILILFSSIRPINSRKHPEELKVFYHLLYISILLALFILFLTIAQKQASFSHAGYVSGACVIIVMLCLPLLIAFREEFFLYKLNLQNKNKHPSNSSSVTVSIILEQQQLASKETTPPTSNTWLSKIMNKPARGEDFTILQAMFSKDMALICLATFSGCGSSLAAIDNLGQIGESLHYPPKAISIFVSWVSIFSFFGRVCSGFISDTLMVKYKLPRPLIFAFAFLITSIGQLCIVYPIRGSVYAASLIIGFGFGSQVPLLFAVISELFGLKHYSTLFNWGQLIVPLGSYILNVEVVGKLYDLEVSREHNGVSGKVLACKGAHCFSGSFTILAISTLFGALSMLVLAYRTREFYRGDVYNKYKEDLWIQPTEMEFYCLDKKKDVTDY 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 35121868 35123979 + Sed0010926.1 Sed07g2019 720883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2019 577 Gene3D MFS general substrate transporter like domains 338 544 IPR036259 -
Sed07g2019 577 Pfam Nodulin-like 20 265 IPR010658 -
Sed07g2019 577 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 19 551 - GO:0016020(PANTHER)
Sed07g2019 577 SUPERFAMILY MFS general substrate transporter 24 543 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g2019 Sed-Chr7:35121868 Sed13g2079 Sed-Chr13:25557416 2.50E-289 dispersed
Sed07g2019 Sed-Chr7:35121868 Sed01g0073 Sed-Chr1:720012 4.60E-235 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2019 - - - 0.0