Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2112 ATGAAAAAATTCCCTTCAATTCCTCTGTTTTTTCTCCTCTGCAACTTATGCCTTTCAATGGCGACCTTAAACGATGAGGGAAATGCTCTTTTATCCTTCAAACAGTCCATTACTGAAGACCCATTTGCCTCTCTCAGCAACTGGAATTCTTCTGATGAAACCCCATGTTCTTGGAATGGAGTTACATGCAAGGATCTAAAAGTTGTTTCTCTAAGCATTCCCAAGAAGAAACTCAATGGGGTTCTTCATTTTTCTTTAGGGTTTCTTTCTCAGCTTCGTCATGTGAATCTGAGGAGTAATAACCTTCATGGGAGCTTGCCAATGGAGCTTTTTCATGCTAATGGAATGCAAAGTTTGGTGCTTTATGGGAATTCCTTTTCTGGGTCTGTGCCAAATGAGATTGGTAAGCTCAAAAGCCTTCAAATCTTGGATTTGTCTCATAATTTGTTTAATGGGTCGTTGCCTGTTTCGTTAATGCAATGTGGAAGATTGAGAATTCTTGATGTTAGTCAGAATAATTTTACTAGTTCTCTGCCTCTAGGGTTTGGTTCCAGTTTGAATTTCTTGGAGAAATTGGACCTTTCTTACAATGAGTTTAGTGGTTCAATTCCAATGGATATTGGTAATTTGTCTAGCTTGCAAGGGACTGTTGATTTGTCTCATAATTTGTTTTCTGGTTCAATCCCTGCTAGCCTTGGAAACCTTCCTGAAAAGGTTTATATTGATCTTACTTATAATAATTTGAGTGGTTCTATACCCCAAAATGGTGCTCTTATGAACAGAGGACCAACTGCTTTTATTGGGAATCCTGGTCTATGTGGACCACCATCGAAGAATCCGTGTTCTTCTGAAACTATCGACGCGGGTTCTCCGTCCTCGTTCCCGTTTTTCCCGGATAATTATCCACCTGGGAGTTCTCAGGGCAATGGTAGTAAGTATGATAAAGGAGGGTTGAGTAGGAGCACTTTGGTTGCGATTATCATCAGTGACATTATCGGTATTTGCCTCATCGGGTTGCTGTTTTCGTATTGCTATTCGAGGTTTTGCAGTCATAGAAATGGGAAGAAGGTGGACCAATCTAATTATGGTTTTGAGAAGGGAGAGAAAGGAAGAAGGAAGGATTGTCTCTGCTTTCAAAAGAGCGAATCCGAGGACGTTTCGGAGCATATTGAGCAGTTTGATTTGGTACCTCTGGATTCACGAGTGACGTTTGATCTCGATGAACTTCTCAAGGCATCAGCATTTGTTTTGGGAAAAAGTGGTATTGGGATAGTGTATAAAGTTGTGCTTGAAGATGGACTCACTTTAGCTGTCAGAAGATTGGGTGAAGGAGGTTCACAAAGATTTAAAGAATTTCAAACTGAAGTTGAAGCAATTGGGAAGTTGAGACATCCAAATGTTGTTAGCCTTAGAGCATATTATTGGTCTGTTGATGAGAAACTGCTTATTTATGATTACATAGCAAATGGGAACCTTGCATTTGCCATTCATGGGAAGCCTGGAACAACATCATTTACACCGCTACCGTGGTCTGCTCGGTTAAGAATCATGGAAGGTATCGCCAAAGGGTTGGTTTACTTGCACGAGTTTAGCCCCAAAAAGTATGTCCATGGCAATTTGAAGACAAACAGCATACTTCTTGGACACAACATGGAACCACATATTTCTAATTTTGGGCTCGCCCGCCTCGTTAACATTGCTGGAGGATCTCCAACCGTGGAATCGAGTCACATGACAGAGGAAAAACCACAAGAGAAACAACTAAAATCCGCCACCTCTGAATCTACTACATACAGTTCTGGAATGAATTCTTACTACCAAGCCCCAGAAGCATTCAAAGTCGTGAAGCCCTCGCAAAAATGGGACGTTTACTCATTCGGTGTGATATTACTCGAAATGATCACCGGAAGGTTGCCAATAGTTCAGGTGGGAGCCACGGAGATGGACCTCGTTCAATGGATTCAACTCTGCATTGAGGAAAAGAAGCCGCTTTCAGACGTAATAGACCCGTCTTTGACTCCAGACGACGATGTAGACGAGGAGATCATCGCAGTTTTGAAGATAACATTAGCTTGTGTTCAAAACAGTCCCGAAAGAAGACCTGCGATGAGACATGTTTCTGATGCTTTGAGCAAGATGGTTGTCACTTCAAACTGA 2157 41.63 MKKFPSIPLFFLLCNLCLSMATLNDEGNALLSFKQSITEDPFASLSNWNSSDETPCSWNGVTCKDLKVVSLSIPKKKLNGVLHFSLGFLSQLRHVNLRSNNLHGSLPMELFHANGMQSLVLYGNSFSGSVPNEIGKLKSLQILDLSHNLFNGSLPVSLMQCGRLRILDVSQNNFTSSLPLGFGSSLNFLEKLDLSYNEFSGSIPMDIGNLSSLQGTVDLSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGSIPQNGALMNRGPTAFIGNPGLCGPPSKNPCSSETIDAGSPSSFPFFPDNYPPGSSQGNGSKYDKGGLSRSTLVAIIISDIIGICLIGLLFSYCYSRFCSHRNGKKVDQSNYGFEKGEKGRRKDCLCFQKSESEDVSEHIEQFDLVPLDSRVTFDLDELLKASAFVLGKSGIGIVYKVVLEDGLTLAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNVVSLRAYYWSVDEKLLIYDYIANGNLAFAIHGKPGTTSFTPLPWSARLRIMEGIAKGLVYLHEFSPKKYVHGNLKTNSILLGHNMEPHISNFGLARLVNIAGGSPTVESSHMTEEKPQEKQLKSATSESTTYSSGMNSYYQAPEAFKVVKPSQKWDVYSFGVILLEMITGRLPIVQVGATEMDLVQWIQLCIEEKKPLSDVIDPSLTPDDDVDEEIIAVLKITLACVQNSPERRPAMRHVSDALSKMVVTSN 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 36643734 36646577 + Sed0026461.1 Sed07g2112 720976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2112 718 PANTHER OS05G0588300 PROTEIN 161 713 IPR050994 -
Sed07g2112 718 SUPERFAMILY Protein kinase-like (PK-like) 416 710 IPR011009 -
Sed07g2112 718 Pfam Leucine Rich Repeat 189 210 IPR001611 GO:0005515(InterPro)
Sed07g2112 718 Pfam Leucine Rich Repeat 163 184 IPR001611 GO:0005515(InterPro)
Sed07g2112 718 Pfam Leucine Rich Repeat 217 235 IPR001611 GO:0005515(InterPro)
Sed07g2112 718 Pfam Protein kinase domain 417 706 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed07g2112 718 Pfam Leucine rich repeat 91 149 IPR001611 GO:0005515(InterPro)
Sed07g2112 718 FunFam Leucine-rich repeat receptor-like protein kinase 188 283 - -
Sed07g2112 718 SUPERFAMILY L domain-like 24 276 - -
Sed07g2112 718 Gene3D Ribonuclease Inhibitor 22 281 IPR032675 -
Sed07g2112 718 ProSiteProfiles Protein kinase domain profile. 411 714 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed07g2112 718 FunFam Leucine-rich repeat receptor-like protein kinase 23 180 - -
Sed07g2112 718 Gene3D Transferase(Phosphotransferase) domain 1 487 718 - -
Sed07g2112 718 FunFam Leucine-rich repeat receptor-like protein kinase 394 486 - -
Sed07g2112 718 CDD STKc_IRAK 417 713 - -
Sed07g2112 718 MobiDBLite consensus disorder prediction 572 595 - -
Sed07g2112 718 Gene3D Phosphorylase Kinase; domain 1 379 486 - -
Sed07g2112 718 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g2112 Sed-Chr7:36643734 Sed11g2271 Sed-Chr11:35937671 6.10E-112 dispersed
Sed11g1647 Sed-Chr11:31758718 Sed07g2112 Sed-Chr7:36643734 3.20E-198 wgd
Sed06g1950 Sed-Chr6:43694452 Sed07g2112 Sed-Chr7:36643734 2.20E-279 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79552 PF00069 Pkinase 5.20E-26 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2112 - - - 0.0