Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2279 ATGGCTGACTGTGGAGAAGAGCAGCGCACTTTGGAAGACACTTCAACTTGGGCTGTTGCTGTTGTTTGTTTTTTCTTGGTTGCTATTTCAATCCTCATTGAACATCTCATTCATCTCACTGGAAAGTGGCTGGAGAAAAGGCACAAGCCAGCTCTTGTTGAAGCTCTAGAAAAGGTTAAAGCAGAGCTTATGCTGTTGGGATTTATTTCCTTACTTCTAACCATTGTTCAAGATGCTGTCACTCAAATTTGTGTTTCGAGGAAGCTCGCCGCAACTTGGCGTCCGTGTGCAGGAAGTTCCAAAGCAGCCAAGAGCAGCCGTCTTAAACTTTTTGAATTTTTAGATCCTGATTATGGTTCAAGGCGTATTTTAGCCTCAAAAGGAGATGATGTATGTGCTAAGAAGGGAAAAGTTGCGTTTGTGTCGGCATATGGAATCCACCAGCTCCATATTTTCATCTTTGTACTGGCTGGCTTCCATATCTTATACTGCATCCTTACTCTGGCTTTAGGAAGAACAAAGATGCGCAAATGGGGGTCCTGGGAGGAAGCGACAAAGACAATTGAATACCAGTACAATAATGATCCAGCAAGGTTTAGATTTGCAAGAGATACGACATTTGGACGCCGACACTTGAACGTTTGGAGTCGTACGCCGATTTCCCTCTGGATTGCTTGTTTCTTCAGACAATTCCTTGGATCAGTTACCAAAGTTGATTACATGACACTGAGACATGGATTCATTATTGCACATTTGCCCCCTGGAAGTGAAGTCAAATTTGATTTCCACAAATACATTAGCAGATCTCTCGAAGACGACTTCAAAGTCATCGTCGGGATTAGCCCAGTGATGTGGCTATTTGCTGTTCTGTTCATCCTAACCAATACACATGGGTGGTATTCCTATCTATGGCTGCCTTTCATCTCCTTAATTATAATTCTATTGGTGGGAACCAAGCTCCAAGTTATCATAACAGAGATGGGATTGACAATTCAAGAACGGGGCCATGTCGTGAAGGGTGTTCCTGTTGTTCAGCCTCGCGACGACCTCTTTTGGTTCGGACGCCCGCAACTCATTCTCTTTCTCATTCACTTTGTTCTCTTTCAGAATGCATTTCAGCTTGCTTTCTTTGCTTGGACTTCATATGCATTTACCTTTAGATCTTGCTTCCACCAGCGAATTGAAGACATTGTCATTAGACTCTCAATGGGGGTCATCATACAAGTTCTATGCAGTTATGTGACACTCCCACTCTATGCTCTGGTGACTCAGATGGGCTCGAACATGAAACCGACCATTTTCAACGACCGAGTTGCGACAGCATTGAAGAACTGGCACCACTCCACCAAGAAGAACATGAAGCACCACCGAAACCCGGACGGTAGCTCGCCATTCTCAAGCAGGCCTGCTACTCCAACGCACGGAATGTCTCCTGTTCACCTTCTGCACAAGCACACACAAAGCAGCACATCTCCCAGGCTATCCGATTCAGAACACGATCCTTGGGACCTCGAAGAGCGACCTCATTCTTCACACGGTAGTAGACCCCGTGATCATCAAGAGCATGAAAATTCTGTTACAATTAGAGAACAGGAAATGGCAGCTCAACAGCCAAGTTCAACAGAACCTGGTACCGAAACACGCCCTGCTCGTACCGAACACGGAATCACTAGGAGTCCCTCGGACTTTACATTTGCCAAATGA 1704 45.19 MADCGEEQRTLEDTSTWAVAVVCFFLVAISILIEHLIHLTGKWLEKRHKPALVEALEKVKAELMLLGFISLLLTIVQDAVTQICVSRKLAATWRPCAGSSKAAKSSRLKLFEFLDPDYGSRRILASKGDDVCAKKGKVAFVSAYGIHQLHIFIFVLAGFHILYCILTLALGRTKMRKWGSWEEATKTIEYQYNNDPARFRFARDTTFGRRHLNVWSRTPISLWIACFFRQFLGSVTKVDYMTLRHGFIIAHLPPGSEVKFDFHKYISRSLEDDFKVIVGISPVMWLFAVLFILTNTHGWYSYLWLPFISLIIILLVGTKLQVIITEMGLTIQERGHVVKGVPVVQPRDDLFWFGRPQLILFLIHFVLFQNAFQLAFFAWTSYAFTFRSCFHQRIEDIVIRLSMGVIIQVLCSYVTLPLYALVTQMGSNMKPTIFNDRVATALKNWHHSTKKNMKHHRNPDGSSPFSSRPATPTHGMSPVHLLHKHTQSSTSPRLSDSEHDPWDLEERPHSSHGSRPRDHQEHENSVTIREQEMAAQQPSSTEPGTETRPARTEHGITRSPSDFTFAK 567
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 38645239 38651944 - Sed0025897.1 Sed07g2279 721143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2279 567 MobiDBLite consensus disorder prediction 529 546 - -
Sed07g2279 567 MobiDBLite consensus disorder prediction 447 567 - -
Sed07g2279 567 PANTHER MLO-LIKE PROTEIN 1 4 520 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Sed07g2279 567 MobiDBLite consensus disorder prediction 459 473 - -
Sed07g2279 567 MobiDBLite consensus disorder prediction 496 528 - -
Sed07g2279 567 Pfam Mlo family 8 485 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g2862 Sed-Chr5:39719941 Sed07g2279 Sed-Chr7:38645239 9.40E-191 dispersed
Sed07g2279 Sed-Chr7:38645239 Sed10g0516 Sed-Chr10:3360296 8.80E-130 dispersed
Sed04g2611 Sed-Chr4:38548389 Sed07g2279 Sed-Chr7:38645239 6.90E-284 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2279 K08472 - csv:101218929 965.296