Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2286 ATGGGGAAGAAAGAGAGTTGGTTTTCTGCAGTGAAGAAGATTCTCAGTAACCATTCTGAGAAGAAAGACAAGAAACAAGACAAATCCAAGAAGAATTTGTTCCAAAAGGAGGAGAGTGTGGATGCCTTTTCCATTTTTGAACAATCCCTGTTAGATGTTTCTGCAGAACCTCCTCCTATAGAAGATGATGTCCACCGAACTGAAGAGAATGAACCGAGCTGGCTTATGCATTCAGATACGGCAGAGCCAGAAATGTCTGAGGAAATAGCAGCTATCATGATTCAATCTGCATTTCGTGGATATACGGCCAGGAAAACATTGAGGGGTCTCAAAGCATTGATGAGATTGAGGGCGTTGGTAGAAGGGCACTCTGTGAAACAGCAGGTGGCCTCTGCTTTAAAAAGCATGCAAACTCTTGCACGTGTACAGTCAGAGATTCGTGCAAGGAGAATAAGAATGTCGGAAGAAAATCGGGCTCTCCAGCAGCAACTTTGTAATAAACGCGAGAAGGAACTCGAGAAGTCAAAAAATCATGTGGATGATGACTGGAATCATAGCACCCGATCAAAAGCACATATTGAAGCTAAACTATTGAACAAGCAAGAAGCTGCAATAAGAAGAGAAAGGGCTCTGGCTTATGCTCACTCGCATCAGCAAACATGGAGGAACTCTCCGAAAACTGCAGCCACTACTGTCATGGATCCAAACAATCCCCACTGGGGTTGGAGTTGGTTGGAGAGGTGGATGGAGGCTCGTCCATGGGAACCTCGAAGCACTGCCAATCACCCAGGCCACATGTCTAGCACAAGTGTCGCAACTCGTGCACCAATGGTCGACGTAATCCAGATATATGCTTGTCGTGACGAAAACTCTCCTGCCAAGTCTTCTCCAAGGACTTCTACCAGCCAAAAGTCAAACCAGCGGCATAGGCATCAGTCACCTTCAACTCCCAAGGCATTATCTTCACCATCTAGCAGAAAGAAAACAAACCTAGCCAACGCAGGGGTAGGCAGCTGGGGCAGGGATGATGACACAAGGAGCACTGCAAGTGTCAATCCAAAGCTCACCCGGAGGCATTCTATTGCAGAATCATCGTTGAGGGACGAATTGAGCCTTGCCAGTTTACCTTCGGTTTCAAGTCATGCATCGCCATCAAAGCCCATGACGGCTCGGTCCCGGTCGGCAGGTTCATCCGCGGCAGAGAGGAAAGGGACAATGGAAAAAGGATCTGCAAATAAAAGGCTCTCCTTTACAACTTCCCCTGCTAAACCAAGGAGGCTATCAAGTCCTCCAATTGTGAGTACCAGCCAAGTCCTTTAA 1320 47.2 MGKKESWFSAVKKILSNHSEKKDKKQDKSKKNLFQKEESVDAFSIFEQSLLDVSAEPPPIEDDVHRTEENEPSWLMHSDTAEPEMSEEIAAIMIQSAFRGYTARKTLRGLKALMRLRALVEGHSVKQQVASALKSMQTLARVQSEIRARRIRMSEENRALQQQLCNKREKELEKSKNHVDDDWNHSTRSKAHIEAKLLNKQEAAIRRERALAYAHSHQQTWRNSPKTAATTVMDPNNPHWGWSWLERWMEARPWEPRSTANHPGHMSSTSVATRAPMVDVIQIYACRDENSPAKSSPRTSTSQKSNQRHRHQSPSTPKALSSPSSRKKTNLANAGVGSWGRDDDTRSTASVNPKLTRRHSIAESSLRDELSLASLPSVSSHASPSKPMTARSRSAGSSAAERKGTMEKGSANKRLSFTTSPAKPRRLSSPPIVSTSQVL 439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 38714711 38720076 + Sed0005571.1 Sed07g2286 721150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2286 439 PANTHER IQ-DOMAIN 5-RELATED 6 395 - -
Sed07g2286 439 MobiDBLite consensus disorder prediction 288 439 - -
Sed07g2286 439 MobiDBLite consensus disorder prediction 343 359 - -
Sed07g2286 439 MobiDBLite consensus disorder prediction 55 74 - -
Sed07g2286 439 MobiDBLite consensus disorder prediction 370 399 - -
Sed07g2286 439 Pfam IQ calmodulin-binding motif 90 108 IPR000048 GO:0005515(InterPro)
Sed07g2286 439 ProSiteProfiles IQ motif profile. 87 115 - -
Sed07g2286 439 MobiDBLite consensus disorder prediction 292 332 - -
Sed07g2286 439 MobiDBLite consensus disorder prediction 58 74 - -
Sed07g2286 439 MobiDBLite consensus disorder prediction 411 439 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g2286 Sed-Chr7:38714711 Sed14g0426 Sed-Chr14:4402517 1.20E-65 dispersed
Sed04g2615 Sed-Chr4:38598647 Sed07g2286 Sed-Chr7:38714711 2.30E-144 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2286 - - - 0.0