Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed07g2441 | ATGGTTCTTGAAGCTGCTGTCAAGGCCGCCGTTGGAGCTCCTGATGTAATCGGAGACTGTCCTTTCAGCCAGAGGACTCTGTTAACTTTAGAGGAGAAGAAACTTGAGTACAAACTGCATCTCATCAATCTCTCTGATAAACCCACTTGGTTCTTGGAAGTGAGCCCTGCAGGGAAGGTGCCGGTGGTGAAGTTTGATGACAAATGGGTTCCTGATTCTGATGTGATTGTGAAGACTCTTGAAGAGAAGTACCCTGTGCCTTCTCTTGTTACTCCTCCTGAATTGACTTCTGTGGGGTCAAAGATCTTTGATTCTTTTGTAAAATTCTTGAAGAGCAAGGACCCAAATGATGGTTCAGAGCAGGCTTTGCTTGAAGTGCTGAAGGAGTTCAACGAGCATCTTAAGGCTCATGGTCCTTATGTTGCTGGAGAGAAGGTAACTGCTGTTGATTTGAGTCTGGCACCAAAGCTGTACCATCTCGATATCGCTCTCGGCCATTTTAAGAAGTGGGCTGTTCCCAAAGACTTGGCCAGTTTAATCACCTACAAAGAGTTGCTTTTTGCTCGAGAATCTTTCGTGAAGACGAAGGCGACACCAGAACATATAATTGCTGGATGGGAGCCCAAGGTGAATCCTGCATGA | 642 | 45.95 | MVLEAAVKAAVGAPDVIGDCPFSQRTLLTLEEKKLEYKLHLINLSDKPTWFLEVSPAGKVPVVKFDDKWVPDSDVIVKTLEEKYPVPSLVTPPELTSVGSKIFDSFVKFLKSKDPNDGSEQALLEVLKEFNEHLKAHGPYVAGEKVTAVDLSLAPKLYHLDIALGHFKKWAVPKDLASLITYKELLFARESFVKTKATPEHIIAGWEPKVNPA | 213 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 40212005 | 40217694 | + | Sed0015050.1 | Sed07g2441 | 721305 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed07g2441 | 213 | PANTHER | GLUTATHIONE S-TRANSFERASE DHAR2-RELATED | 3 | 209 | IPR044627 | GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro) | |
Sed07g2441 | 213 | Pfam | Glutathione S-transferase, N-terminal domain | 20 | 82 | IPR004045 | - | |
Sed07g2441 | 213 | SFLD | Glutathione Transferase (cytosolic) | 20 | 167 | IPR040079 | - | |
Sed07g2441 | 213 | FunFam | Glutathione S-transferase DHAR3, chloroplastic | 90 | 212 | - | - | |
Sed07g2441 | 213 | Gene3D | - | 90 | 212 | - | - | |
Sed07g2441 | 213 | SUPERFAMILY | GST C-terminal domain-like | 102 | 211 | IPR036282 | - | |
Sed07g2441 | 213 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 10 | 88 | IPR004045 | - | |
Sed07g2441 | 213 | Pfam | Glutathione S-transferase, C-terminal domain | 119 | 168 | - | - | |
Sed07g2441 | 213 | CDD | GST_N_family | 20 | 81 | - | - | |
Sed07g2441 | 213 | Gene3D | Glutaredoxin | 1 | 89 | - | - | |
Sed07g2441 | 213 | FunFam | Glutathione S-transferase DHAR3 chloroplastic | 1 | 89 | - | - | |
Sed07g2441 | 213 | SUPERFAMILY | Thioredoxin-like | 19 | 85 | IPR036249 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed07g2441 | Sed-Chr7:40212005 | Sed07g2443 | Sed-Chr7:40247567 | 7.00E-88 | dispersed | |
Sed07g2441 | Sed-Chr7:40212005 | Sed07g2442 | Sed-Chr7:40239368 | 1.80E-96 | tandem | |
Sed06g1393 | Sed-Chr6:38347862 | Sed07g2441 | Sed-Chr7:40212005 | 9.40E-74 | transposed | |
Sed04g2794 | Sed-Chr4:39968998 | Sed07g2441 | Sed-Chr7:40212005 | 6.90E-96 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed07g2441 | K21888 | - | csv:101203666 | 368.622 |