Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2441 ATGGTTCTTGAAGCTGCTGTCAAGGCCGCCGTTGGAGCTCCTGATGTAATCGGAGACTGTCCTTTCAGCCAGAGGACTCTGTTAACTTTAGAGGAGAAGAAACTTGAGTACAAACTGCATCTCATCAATCTCTCTGATAAACCCACTTGGTTCTTGGAAGTGAGCCCTGCAGGGAAGGTGCCGGTGGTGAAGTTTGATGACAAATGGGTTCCTGATTCTGATGTGATTGTGAAGACTCTTGAAGAGAAGTACCCTGTGCCTTCTCTTGTTACTCCTCCTGAATTGACTTCTGTGGGGTCAAAGATCTTTGATTCTTTTGTAAAATTCTTGAAGAGCAAGGACCCAAATGATGGTTCAGAGCAGGCTTTGCTTGAAGTGCTGAAGGAGTTCAACGAGCATCTTAAGGCTCATGGTCCTTATGTTGCTGGAGAGAAGGTAACTGCTGTTGATTTGAGTCTGGCACCAAAGCTGTACCATCTCGATATCGCTCTCGGCCATTTTAAGAAGTGGGCTGTTCCCAAAGACTTGGCCAGTTTAATCACCTACAAAGAGTTGCTTTTTGCTCGAGAATCTTTCGTGAAGACGAAGGCGACACCAGAACATATAATTGCTGGATGGGAGCCCAAGGTGAATCCTGCATGA 642 45.95 MVLEAAVKAAVGAPDVIGDCPFSQRTLLTLEEKKLEYKLHLINLSDKPTWFLEVSPAGKVPVVKFDDKWVPDSDVIVKTLEEKYPVPSLVTPPELTSVGSKIFDSFVKFLKSKDPNDGSEQALLEVLKEFNEHLKAHGPYVAGEKVTAVDLSLAPKLYHLDIALGHFKKWAVPKDLASLITYKELLFARESFVKTKATPEHIIAGWEPKVNPA 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 40212005 40217694 + Sed0015050.1 Sed07g2441 721305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2441 213 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 3 209 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro)
Sed07g2441 213 Pfam Glutathione S-transferase, N-terminal domain 20 82 IPR004045 -
Sed07g2441 213 SFLD Glutathione Transferase (cytosolic) 20 167 IPR040079 -
Sed07g2441 213 FunFam Glutathione S-transferase DHAR3, chloroplastic 90 212 - -
Sed07g2441 213 Gene3D - 90 212 - -
Sed07g2441 213 SUPERFAMILY GST C-terminal domain-like 102 211 IPR036282 -
Sed07g2441 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Sed07g2441 213 Pfam Glutathione S-transferase, C-terminal domain 119 168 - -
Sed07g2441 213 CDD GST_N_family 20 81 - -
Sed07g2441 213 Gene3D Glutaredoxin 1 89 - -
Sed07g2441 213 FunFam Glutathione S-transferase DHAR3 chloroplastic 1 89 - -
Sed07g2441 213 SUPERFAMILY Thioredoxin-like 19 85 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g2441 Sed-Chr7:40212005 Sed07g2443 Sed-Chr7:40247567 7.00E-88 dispersed
Sed07g2441 Sed-Chr7:40212005 Sed07g2442 Sed-Chr7:40239368 1.80E-96 tandem
Sed06g1393 Sed-Chr6:38347862 Sed07g2441 Sed-Chr7:40212005 9.40E-74 transposed
Sed04g2794 Sed-Chr4:39968998 Sed07g2441 Sed-Chr7:40212005 6.90E-96 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2441 K21888 - csv:101203666 368.622