Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2442 ATGGCCATTGAAGTTGCAGTCAAGGCTGCTGCTGGTGCGCCCGATGTTCTTGGAGACTGTCCTTTCAGCCAAAGGGTTCTATTAACTTTGGAGGAGAAGAAAGTTCCTTATAAATTGCATCTCATCGATTTATCAGACAAACCCAGTTGGTTCTTGGAAGTGAGCCCAGAAGGGAAGGTGCCAGCCGCGAAGATTGATGAGAAATGGGTTCCCGATTCTGATGTCATTGTGGGGATTCTTGAGGAGAAGTTTCCAGACCCTTCTCTTGTTACACCTTGTGATTTTTCTTCTGTGGGATCAAAGATAAATGGTGCTTTTGTAAAATTCTTGAAGAGCAAGGACCCGAATGATGGTTCAGAGCAGGCTCTGCTCGAAGAGTTGAAGGCATTGGACGAGCATCTCAAGGCCCATGGTCCTTATGTTGCTGGAGATAAGGTAACTGCGGTTGATTTGAGTCTGGCACCAAAGTTGTACCAACTTGATATTGCTCTTGGCCATTTCAAGAAGTGGATTTTCCCTGAAAACTTAACCTCTTTATCCGAATACAAAGAGTTGCTTTTTGCTCGAGAATCTTTCATGAATACGAAGGCGGCCCCAGAGCATATAATTTCTGGTTGGGAGCCTAAGGTGAATCCTCCTGCAGAACATGTCATTTCTTGTTCGGAGCCAAAGGTCATTGAGGTTGCTGTCAAGGCTGCTGTTGGGGCACCCGATGTCCTTGGAGACTGCCCTTTCACCCAGAGAGTTCTATTAACCTTAGAGGAGAAGAAAGTTCCATACAAATGGCATCTCATCGATGTATCCGACAAACCCAGTTGGTTCTTGGATGTGAGCCCAGAAGGAAAGGTGCCAGTAGCAAAGATTGATGACAAATGGGTTCCTGACTCCGATGTCATTGTGGGGCTTCTTGAGGAGAAGTATCCAGAGCCTTCTCTTGTGACTCCTCCTCAATTTTCTTCTGTGGGATCAAAGATAAATGGTGCTTTTGTAAAATTCTTGAAGAGCAAGGATCCAAATGATGGTTCAGAGCAGGCTTTGCTTGAAGAGTTGAAGGTGTTGGCCGAGCATCTCAATGCCCATGGTCCTTATGTTGCTGGAGAGAAGGTTACTGCTGTTGATTTGAATCTGGCACCAAAGTTGCACCATCTTGATGTTGCACTTGGCCATTTCAAGCAGTGGATTTTCCCGGAAAACCTAACCAGTTTATCCGAATATAAAAAGTTGCTTTTTGCTCGAGAATCCTTCATGAAGACGAAGGCCGCCCCCAAACACGTAATTTCTGGTTGGGAGCCCAAGGTGAATGCTGCATGA 1311 45.61 MAIEVAVKAAAGAPDVLGDCPFSQRVLLTLEEKKVPYKLHLIDLSDKPSWFLEVSPEGKVPAAKIDEKWVPDSDVIVGILEEKFPDPSLVTPCDFSSVGSKINGAFVKFLKSKDPNDGSEQALLEELKALDEHLKAHGPYVAGDKVTAVDLSLAPKLYQLDIALGHFKKWIFPENLTSLSEYKELLFARESFMNTKAAPEHIISGWEPKVNPPAEHVISCSEPKVIEVAVKAAVGAPDVLGDCPFTQRVLLTLEEKKVPYKWHLIDVSDKPSWFLDVSPEGKVPVAKIDDKWVPDSDVIVGLLEEKYPEPSLVTPPQFSSVGSKINGAFVKFLKSKDPNDGSEQALLEELKVLAEHLNAHGPYVAGEKVTAVDLNLAPKLHHLDVALGHFKQWIFPENLTSLSEYKKLLFARESFMKTKAAPKHVISGWEPKVNAA 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 40239368 40245485 + Sed0018854.1 Sed07g2442 721306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2442 436 Pfam Glutathione S-transferase, N-terminal domain 242 310 IPR004045 -
Sed07g2442 436 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Sed07g2442 436 CDD GST_N_family 20 77 - -
Sed07g2442 436 Gene3D - 90 212 - -
Sed07g2442 436 Gene3D Glutaredoxin 224 312 - -
Sed07g2442 436 Gene3D Glutaredoxin 1 89 - -
Sed07g2442 436 SUPERFAMILY GST C-terminal domain-like 102 211 IPR036282 -
Sed07g2442 436 FunFam Glutathione S-transferase DHAR3, chloroplastic 313 435 - -
Sed07g2442 436 SFLD Glutathione Transferase (cytosolic) 19 166 IPR040079 -
Sed07g2442 436 SFLD Glutathione Transferase (cytosolic) 242 393 IPR040079 -
Sed07g2442 436 Pfam Glutathione S-transferase, C-terminal domain 343 405 - -
Sed07g2442 436 Pfam Glutathione S-transferase, C-terminal domain 119 171 - -
Sed07g2442 436 SFLD Main (cytGST) 242 393 - -
Sed07g2442 436 SFLD Main (cytGST) 19 166 - -
Sed07g2442 436 FunFam Glutathione S-transferase DHAR3 chloroplastic 224 312 - -
Sed07g2442 436 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 233 311 IPR004045 -
Sed07g2442 436 CDD GST_N_family 243 300 - -
Sed07g2442 436 Pfam Glutathione S-transferase, N-terminal domain 20 82 IPR004045 -
Sed07g2442 436 FunFam Glutathione S-transferase DHAR3 chloroplastic 1 89 - -
Sed07g2442 436 Gene3D - 313 435 - -
Sed07g2442 436 SUPERFAMILY Thioredoxin-like 19 87 IPR036249 -
Sed07g2442 436 FunFam Glutathione S-transferase DHAR3, chloroplastic 90 212 - -
Sed07g2442 436 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 289 435 IPR010987 -
Sed07g2442 436 SUPERFAMILY Thioredoxin-like 242 310 IPR036249 -
Sed07g2442 436 SUPERFAMILY GST C-terminal domain-like 319 433 IPR036282 -
Sed07g2442 436 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 66 212 IPR010987 -
Sed07g2442 436 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 3 209 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g2794 Sed-Chr4:39968998 Sed07g2442 Sed-Chr7:40239368 4.50E-95 dispersed
Sed06g1393 Sed-Chr6:38347862 Sed07g2442 Sed-Chr7:40239368 8.30E-70 dispersed
Sed07g2442 Sed-Chr7:40239368 Sed07g2444 Sed-Chr7:40247567 7.60E-65 dispersed
Sed07g2441 Sed-Chr7:40212005 Sed07g2442 Sed-Chr7:40239368 1.80E-96 tandem
Sed07g2442 Sed-Chr7:40239368 Sed07g2443 Sed-Chr7:40247567 3.70E-96 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2442 K21888 - csv:101203666 347.051