Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2443 ATGACCATTGAAGTTGCTGTCAAGGCTGCAGTCTCTGCACCCAATTTTATTGGAGACTGTCCTTTCACCCAGAGGGTTCTATTGACTTTGGAGGAGAAGAATGCTCCTTACAAGTTGCATCTCATCAATCTCTCTGATAAACCCTCATGGTTCTTGAAAGTGAACCCAGAAGGGAAGGTGCCAGCGGCCAAGATTGATGGCAACTGGGTTCCTGATTCTGATGTCATTGTGGGGATTCTTGAGGAAAAGTTTCCAGAGCCTTCTCTTGTTACTCCCCCTCAATTTTCTTCTGTGGGATCAAAGATAGGTGGTGCTTATGGAAAATTCTTGAAGAGCAAGAACCCGAATGACTGCTCGGAACAGGCTTTGCTTGAAGAGTTGAAGGCGTTGGATAATCATCTCAAGGCGCACGGTCCTTATGTTGCTGGAGATAAGGTAACTGCTGTTGATTTGAATCTGGCACCAAAGTTATACCATCTTGACATTGCTCTTGGCCATTTCAAGAAGTGGACTTTCCCCAAAAGCTTGGCTTGTTTATCTGCATACAAAAAGTTGCTTTTTGCTCGAGAATCTTTTTTGAAGACGAAGGCCGCCCCAGAACATGTAGTTTCGGGTTGGGGGGCGAGGGGGGCGAATGCTGCATGA 645 46.05 MTIEVAVKAAVSAPNFIGDCPFTQRVLLTLEEKNAPYKLHLINLSDKPSWFLKVNPEGKVPAAKIDGNWVPDSDVIVGILEEKFPEPSLVTPPQFSSVGSKIGGAYGKFLKSKNPNDCSEQALLEELKALDNHLKAHGPYVAGDKVTAVDLNLAPKLYHLDIALGHFKKWTFPKSLACLSAYKKLLFARESFLKTKAAPEHVVSGWGARGANAA 214
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 40247567 40250277 + Sed0025725.1 Sed07g2443 721307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2443 214 FunFam Glutathione S-transferase DHAR3 chloroplastic 1 89 - -
Sed07g2443 214 SFLD Glutathione Transferase (cytosolic) 19 181 IPR040079 -
Sed07g2443 214 CDD GST_N_family 20 77 - -
Sed07g2443 214 SUPERFAMILY GST C-terminal domain-like 104 205 IPR036282 -
Sed07g2443 214 Gene3D - 90 210 - -
Sed07g2443 214 FunFam Glutathione S-transferase DHAR3, chloroplastic 90 211 - -
Sed07g2443 214 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 3 206 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro)
Sed07g2443 214 Gene3D Glutaredoxin 1 89 - -
Sed07g2443 214 Pfam Glutathione S-transferase, N-terminal domain 20 82 IPR004045 -
Sed07g2443 214 SUPERFAMILY Thioredoxin-like 19 87 IPR036249 -
Sed07g2443 214 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Sed07g2443 214 SFLD Main (cytGST) 19 181 - -
Sed07g2443 214 Pfam Glutathione S-transferase, C-terminal domain 121 175 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g2441 Sed-Chr7:40212005 Sed07g2443 Sed-Chr7:40247567 7.00E-88 dispersed
Sed07g2442 Sed-Chr7:40239368 Sed07g2443 Sed-Chr7:40247567 3.70E-96 tandem
Sed07g2443 Sed-Chr7:40247567 Sed07g2444 Sed-Chr7:40247567 1.70E-86 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2443 K21888 - csv:101203666 341.658