Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed07g2443 | ATGACCATTGAAGTTGCTGTCAAGGCTGCAGTCTCTGCACCCAATTTTATTGGAGACTGTCCTTTCACCCAGAGGGTTCTATTGACTTTGGAGGAGAAGAATGCTCCTTACAAGTTGCATCTCATCAATCTCTCTGATAAACCCTCATGGTTCTTGAAAGTGAACCCAGAAGGGAAGGTGCCAGCGGCCAAGATTGATGGCAACTGGGTTCCTGATTCTGATGTCATTGTGGGGATTCTTGAGGAAAAGTTTCCAGAGCCTTCTCTTGTTACTCCCCCTCAATTTTCTTCTGTGGGATCAAAGATAGGTGGTGCTTATGGAAAATTCTTGAAGAGCAAGAACCCGAATGACTGCTCGGAACAGGCTTTGCTTGAAGAGTTGAAGGCGTTGGATAATCATCTCAAGGCGCACGGTCCTTATGTTGCTGGAGATAAGGTAACTGCTGTTGATTTGAATCTGGCACCAAAGTTATACCATCTTGACATTGCTCTTGGCCATTTCAAGAAGTGGACTTTCCCCAAAAGCTTGGCTTGTTTATCTGCATACAAAAAGTTGCTTTTTGCTCGAGAATCTTTTTTGAAGACGAAGGCCGCCCCAGAACATGTAGTTTCGGGTTGGGGGGCGAGGGGGGCGAATGCTGCATGA | 645 | 46.05 | MTIEVAVKAAVSAPNFIGDCPFTQRVLLTLEEKNAPYKLHLINLSDKPSWFLKVNPEGKVPAAKIDGNWVPDSDVIVGILEEKFPEPSLVTPPQFSSVGSKIGGAYGKFLKSKNPNDCSEQALLEELKALDNHLKAHGPYVAGDKVTAVDLNLAPKLYHLDIALGHFKKWTFPKSLACLSAYKKLLFARESFLKTKAAPEHVVSGWGARGANAA | 214 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 40247567 | 40250277 | + | Sed0025725.1 | Sed07g2443 | 721307 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed07g2443 | 214 | FunFam | Glutathione S-transferase DHAR3 chloroplastic | 1 | 89 | - | - | |
Sed07g2443 | 214 | SFLD | Glutathione Transferase (cytosolic) | 19 | 181 | IPR040079 | - | |
Sed07g2443 | 214 | CDD | GST_N_family | 20 | 77 | - | - | |
Sed07g2443 | 214 | SUPERFAMILY | GST C-terminal domain-like | 104 | 205 | IPR036282 | - | |
Sed07g2443 | 214 | Gene3D | - | 90 | 210 | - | - | |
Sed07g2443 | 214 | FunFam | Glutathione S-transferase DHAR3, chloroplastic | 90 | 211 | - | - | |
Sed07g2443 | 214 | PANTHER | GLUTATHIONE S-TRANSFERASE DHAR2-RELATED | 3 | 206 | IPR044627 | GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro) | |
Sed07g2443 | 214 | Gene3D | Glutaredoxin | 1 | 89 | - | - | |
Sed07g2443 | 214 | Pfam | Glutathione S-transferase, N-terminal domain | 20 | 82 | IPR004045 | - | |
Sed07g2443 | 214 | SUPERFAMILY | Thioredoxin-like | 19 | 87 | IPR036249 | - | |
Sed07g2443 | 214 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 10 | 88 | IPR004045 | - | |
Sed07g2443 | 214 | SFLD | Main (cytGST) | 19 | 181 | - | - | |
Sed07g2443 | 214 | Pfam | Glutathione S-transferase, C-terminal domain | 121 | 175 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed07g2441 | Sed-Chr7:40212005 | Sed07g2443 | Sed-Chr7:40247567 | 7.00E-88 | dispersed | |
Sed07g2442 | Sed-Chr7:40239368 | Sed07g2443 | Sed-Chr7:40247567 | 3.70E-96 | tandem | |
Sed07g2443 | Sed-Chr7:40247567 | Sed07g2444 | Sed-Chr7:40247567 | 1.70E-86 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed07g2443 | K21888 | - | csv:101203666 | 341.658 |