Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2444 ATGACCATTGAAGTTGCTGTCAAGGCTGCAGTCTCTGCACCCAATTTTATTGGAGACTGTCCTTTCACCCAGAGGGTTCTATTGACTTTGGAGGAGAAGAATGCTCCTTACAAGTTGCATCTCATCAATCTCTCTGATAAACCCTCATGGGGATCAAAGATAGGTGGTGCTTATGGAAAATTCTTGAAGAGCAAGAACCCGAATGACTGCTCGGAACAGGCTTTGCTTGAAGAGTTGAAGGCGTTGGATAATCATCTCAAGGCGCACGGTCCTTATGTTGCTGGAGATAAGGTAACTGCTGTTGATTTGAATCTGGCACCAAAGTTATACCATCTTGACATTGCTCTTGGCCATTTCAAGAAGTGGACTTTCCCCAAAAGCTTGGCTTGTTTATCTGCATACAAAAAGTTGCTTTTTGCTCGAGAATCTTTTTTGAAGACGAAGGCCGCCCCAGAACATGTAGTTTCGGGTTGGGGGGCGAGGGGGGCGAATGCTGCATGA 501 45.71 MTIEVAVKAAVSAPNFIGDCPFTQRVLLTLEEKNAPYKLHLINLSDKPSWGSKIGGAYGKFLKSKNPNDCSEQALLEELKALDNHLKAHGPYVAGDKVTAVDLNLAPKLYHLDIALGHFKKWTFPKSLACLSAYKKLLFARESFLKTKAAPEHVVSGWGARGANAA 166
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 40247567 40250277 + Sed0025725.2 Sed07g2444 721308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2444 166 FunFam Glutathione S-transferase DHAR3, chloroplastic 43 163 - -
Sed07g2444 166 Gene3D - 56 164 - -
Sed07g2444 166 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 3 50 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro)
Sed07g2444 166 Pfam Glutathione S-transferase, C-terminal domain 73 128 - -
Sed07g2444 166 Pfam Glutathione S-transferase, N-terminal domain 20 56 IPR004045 -
Sed07g2444 166 SUPERFAMILY GST C-terminal domain-like 60 157 IPR036282 -
Sed07g2444 166 Gene3D Glutaredoxin 1 55 - -
Sed07g2444 166 SUPERFAMILY Thioredoxin-like 19 56 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g2442 Sed-Chr7:40239368 Sed07g2444 Sed-Chr7:40247567 7.60E-65 dispersed
Sed07g2443 Sed-Chr7:40247567 Sed07g2444 Sed-Chr7:40247567 1.70E-86 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2444 K21888 - csv:101203666 241.121