Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed07g2453 | ATGGTGGGCACTGAGGAGGATTCTGGTACTTCTGGGTCTGCAGTGCAGCTTTCTGGGGGAGGTCGGAAATTGTTCTGGCGCTCGGCCTCGTGGTCTGCGTCGCGTTCGTCCCTTCACCATCCTGAAGTGAACAAAGATGGTGGAGACCCCAATGGGAGTCTTGGTGATAGTAATGGACCGAGCCGAATCTACCCTGCTCCTCCGTTAACTCCAAGGTCACAGCAGCATTGCAAGGCAAGGTCGTGTTTGCCCCCTTTACAGCCTCTCTCGATAGCCCGCCGAAGCTTGGATGAATGGCCGAAGGCGGGATCGGATGATATAGGCGAATGGCCGCAACCTCCTACTCCAAGTGGTAGAGGAAATGGGGAGAGGTTGAAACTTGATTTGTCGACGATTCAGAGAGTCCCGGATAAGAATTGTGGGCTTGTGAAGAGGGATAAGATTGCTTTCTTTGACAAAAAGTGTTCAAAAGTGGCGGAACATGTATATCTTGGTGGAGATGCGGTTGCTCGAGATAGGGATATACTTAAACAGAATGGAATAACTCATGTGTTGAACTGTGTAGGTTTTGTTTGCCCAGAGTACTTCAAAGATGATTTCGTGTACAGAACTTTGTGGTTGCAGGATAGCCCATCTGAGGATATTACTAGTATTCTTTATGATGTTTTTGACTATTTTGAAGACGTTAGAGAGCAAAGTGGAAGGGTTTTTGTTCATTGTTGCCAGGGAGTATCTCGGTCAACATCCTTGGTGATTGCTTATCAGATGTGGAGAGAAGGACAGAGTTTTGATGATGCATTTCAATATGTGAAGGCAGCAAGAGGTATAGCTGACCCAAATATGGGATTTGCTTGCCAGTTATTACAGTGCCAAAAGAGGGTCCATGCTTTCCCTCTTAGCCCTAGTTCACTGTTGAGGATGTATCGAGTTGCTCCGCACTCACCTTATGATCCCTTGCATTTGGTCCCTAAAATGTTGAATGATCCTTCACCCTCTGCTCTGGATTCTAGAGGAGCCTTTATCATTCATATACCTTCTGCCATATTTGTTTGGATTGGTAAGAACTGTGAAGCAATCATGGAAAGGGATGCGAGGGGAGCTGTTGTACAGATTGTTCGATACGAGAGAGTGCAAGGTCCTATATATGTAATTAAGGAAGGGGAAGAACCAGGAAACTTTTGGGATTCTTTTGCAAACCTGTTACCTTTAATGTATAAATCCAATAGTAAAATCAATCTGGGGGAATCGAAAGGTAAGCCTTATCCAGGGGAGAGGAAAGTTGATTCCTATAATGTGGATTTTGAAATTTTCCAGAAGGCTATTACTGGTGGTTTTGTTCCCCCGTTTCCTTCATCTGAGAACAAGCACGAAACCCATCTTCCTGTTAGAGAAAGCAGTTGGAGTATGCTTAGGCGTAAGTTTGCCTCTGGGAATATGAAAGATTTTGTATCAGCTCCTCGAATATCGCTCTCTAGGGCTTATTCAGACTCTTTGATGATGGTGCATTTTTCTTCCAAATCTTCATCGCCTTCGGCATTTTCACTGTCTTCATCATCTTCTTCACCTATCTATCTTTCTCCTGATTCCCTTTCATCTGATTCAAGTTCAAGTTCAAGTTCCAAGTATTTTTCAGAATCCTCTTTAGATTCTCCTTCTGCATCTTCACCTCGAGTTCCAGTTTCTTCCTCTCTGTCTAGCTTTTCTAACATGACTCTTATCTCATCCAATAGTTCCTTAGAAACGGCGCCCCATGGTCCAGAAACTCGTGATGCAGTTCCTTTGGAATCAAGTTCTCACCCCTTCTCATTCCCCTCCAAAAAGTTTTCACCTTCTCTTGCAGAACGCCGAGGTAGTGCAAAATCTCTGACATTGCCTACAATGCCTAGTAAAATCAGAGCAACAAATAGTGCTTCAAGGTTTCTTTCCACTCAAGAAGATGGTAAGAGGAAGAACAATATTTCTTGCTCTCTTAATGTATCAGTTAACACAAAAAATGGCTCAGAGCCTATAGATAGTAGGGTTGTAAATGAATATACAAGTTCCACTCAGAATTTCAAGAATATTGATAATGTAATGGGTGTGAGTATAGGCAGTGAGGTGTTGTGTGAGCAGGAAACTAAAGTTGATGGACAATCTACTACTAGTTCATGGAAAAGCTACCCCAAAATTTTTGAAGAAGGCATGGTATCCACTGTGTCAAATGGGAAGCAAGATGACGAATTTGTCCAACCTATGGCGTATTGTTGGCCGGAGTTAGAAAAGATTACAGCTTTTGACACAAGTTGCCTCAATTCTAAAGCTGCTATGGTGGTTTTCTCTCCAAGTAGGTATTTGGGCAAGAAGGATGACATGAGGCTGTATATTTGGGTAGGAAGTTCTTTTGACCATGATTTATATCAGGTTCAAGTAAAGAGGGATAAAGAGTTGGTAGATTTAGAAAAGATAGACTGGGTTAAAGTTGGACAATATGTACTTACTGAAATAGGCCTGCCAGAAAACACAGAAATTAAGATCGTCAAAGAAGGTGAAGAAACAGAGGAATTTCTTGCGCGATTGAGTCTGTTGTAG | 2568 | 42.8 | MVGTEEDSGTSGSAVQLSGGGRKLFWRSASWSASRSSLHHPEVNKDGGDPNGSLGDSNGPSRIYPAPPLTPRSQQHCKARSCLPPLQPLSIARRSLDEWPKAGSDDIGEWPQPPTPSGRGNGERLKLDLSTIQRVPDKNCGLVKRDKIAFFDKKCSKVAEHVYLGGDAVARDRDILKQNGITHVLNCVGFVCPEYFKDDFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQSGRVFVHCCQGVSRSTSLVIAYQMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRVAPHSPYDPLHLVPKMLNDPSPSALDSRGAFIIHIPSAIFVWIGKNCEAIMERDARGAVVQIVRYERVQGPIYVIKEGEEPGNFWDSFANLLPLMYKSNSKINLGESKGKPYPGERKVDSYNVDFEIFQKAITGGFVPPFPSSENKHETHLPVRESSWSMLRRKFASGNMKDFVSAPRISLSRAYSDSLMMVHFSSKSSSPSAFSLSSSSSSPIYLSPDSLSSDSSSSSSSKYFSESSLDSPSASSPRVPVSSSLSSFSNMTLISSNSSLETAPHGPETRDAVPLESSSHPFSFPSKKFSPSLAERRGSAKSLTLPTMPSKIRATNSASRFLSTQEDGKRKNNISCSLNVSVNTKNGSEPIDSRVVNEYTSSTQNFKNIDNVMGVSIGSEVLCEQETKVDGQSTTSSWKSYPKIFEEGMVSTVSNGKQDDEFVQPMAYCWPELEKITAFDTSCLNSKAAMVVFSPSRYLGKKDDMRLYIWVGSSFDHDLYQVQVKRDKELVDLEKIDWVKVGQYVLTEIGLPENTEIKIVKEGEETEEFLARLSLL | 855 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 40280447 | 40285913 | + | Sed0015325.1 | Sed07g2453 | 721317 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed07g2453 | 855 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 154 | 296 | IPR020422 | GO:0006470(InterPro) | |
Sed07g2453 | 855 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 148 | 295 | IPR029021 | - | |
Sed07g2453 | 855 | MobiDBLite | consensus disorder prediction | 577 | 624 | - | - | |
Sed07g2453 | 855 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 213 | 274 | IPR000387 | GO:0016311(InterPro) | |
Sed07g2453 | 855 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 238 | 248 | IPR016130 | GO:0016311(InterPro) | |
Sed07g2453 | 855 | MobiDBLite | consensus disorder prediction | 30 | 78 | - | - | |
Sed07g2453 | 855 | Pfam | Dual specificity phosphatase, catalytic domain | 162 | 292 | IPR000340 | GO:0016311(InterPro) | |
Sed07g2453 | 855 | SMART | VILL_6 | 303 | 400 | IPR007122 | GO:0051015(InterPro) | |
Sed07g2453 | 855 | SUPERFAMILY | Actin depolymerizing proteins | 756 | 852 | - | - | |
Sed07g2453 | 855 | CDD | DSP | 155 | 289 | - | - | |
Sed07g2453 | 855 | PANTHER | MKPA PROTEIN | 13 | 850 | - | - | |
Sed07g2453 | 855 | SUPERFAMILY | Actin depolymerizing proteins | 301 | 405 | - | - | |
Sed07g2453 | 855 | SMART | dsp_5 | 154 | 293 | IPR020422 | GO:0006470(InterPro) | |
Sed07g2453 | 855 | Gene3D | Severin | 305 | 400 | IPR029006 | - | |
Sed07g2453 | 855 | Gene3D | Protein tyrosine phosphatase superfamily | 142 | 296 | IPR029021 | - | |
Sed07g2453 | 855 | MobiDBLite | consensus disorder prediction | 101 | 123 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed04g0575 | Sed-Chr4:4402504 | Sed07g2453 | Sed-Chr7:40280447 | 1.60E-154 | dispersed | |
Sed04g2799 | Sed-Chr4:40003050 | Sed07g2453 | Sed-Chr7:40280447 | 0.00E+00 | dispersed | |
Sed04g2798 | Sed-Chr4:40003050 | Sed07g2453 | Sed-Chr7:40280447 | 0.00E+00 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed07g2453 | - | - | - | 0.0 |