Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2462 ATGCCTAGGGATGCTGGATGTTTAACTGATGGAGACATGAACTATGATAGCTCTTCAAGAATTGAAAACAAGCGTAACCATCAATGGTTTATGGATGGAAGTGCACAGGAGCTATTCAGTAGCAAGAAACAAGCGTTAGAAACTGTAATTACTAGACCTGTTCCAGGAGTTCCACACATGAATGTTTCTCCCTGGGAAAACACTTCAACTTTTCAGTCAGTCCCAGGGCCCTTCACTGATCGCCACTTTGGCTCAGAGGCAATAAGAACTATCAATTTGGTTGATAGTGGTATCACTGTTGGAAATGTAAATATGGACATCGGAAGAAAGGAGTTCGAGAATAATTTTGTAAACAACCCGTCAGTTAACTTGTCCATGTCTCAATCCATTGAGGATTCCTCATCATCCCTCAATTTTGGTGGAATTAGAAAAGTTAAAGTTAATCAAGTCAGGGATCTCGACGTTGGCATGCCTGCCTCTTTGGGGCATGCCTATAGCAGGGGCGATAACTGTACAGTTCCAGTGGGTACAACATTCAACAAAAATCATGAGAGTGCCATATCATTAGGCCATTATAATAGTAGAGATGAGAATGGCATCTCAGTTGGCCCTGCATATCACAAGACAGATGACAATTTTATTTCAATGGGTCATGCTTTCAGCAAGGGTGATGGAAATTTTATTACAATTGGTCATAACTATAGCAAGGGAGACAATAGCATCCTATCAATGAGTCAGCCTTTTGTCAAGGAGGATGACTCTTTTATTTCCATGGGTCAGTCTTATGAGAAGGCAGAAGGCAATATCATTTCTTTTGGTACTTCCTACAATAAAGGGCATGATAATTTTATCTCAATGGGGCCAACCTATAGTAAGGCAGGGGATACTTTCATTTCAATGGCTTCCTCCTACAATAAGGGAAATGAGGATAGCTTATCAATGGGTCCAACCTATGACAAGGTGAACTCTGACATTGTACATGAGGGCCCTAAATATGACAAAGGAGATTCTGGTGCCGTGTCTATGGCACACAACTATCATAAAGATGAGAGTAATACGATATCCTTTGGAGGTTTTGATGATGAGAATGTGGCAAATAATCCTTCTGGTGGGATCATTAGCAGTTACGACTTGTTGATGGCTAATCAGGCTTCTGCCCAAGTATCAGAAATGCCAACCCTGAGAGATTCCGTTGATCCAAATGTGGAAGTAAACATTAACAATGCCACAAAATTTGATGTCAAGATTGACACGAGTTCCAAGAATAAAGAGCCTAGGATGACTAAGAAGGCGTCGCCAAATAGCTTCCCTTCAAATGTTAAAAGTTTGCTCTCAACTGGTATGCTTGATGAGGTTCCTGTGAAATATGTTTCTTGGTCACGGGAGAAAAATCTCAAGGGAATTATAAAAGGGACTGGATATTTGTGCAGCTGTGACAACTGCAATCATGCTAAGGCTCTCAATGCTTATGAATTTGAGAGGCATGCTGGCTGCAAAACCAAACATCCAAATAATCACATTTATTTTGAGAATGGTAAAACTATCTATGCTGTCGTTCAAGAGCTAAAGAATACCCCTCAGGAGTTGCTATTTGATGCAATTCAGAATGTGACTGGCTCTCCCATTAATCAGAAGAATTTTCGTATTTGGAAAGCATCTTATCAAGCTGCCACCCTTGAACTCCAGCGTATTTATGGAAATGACGAAATAATTAGAACTTCTTGA 1725 40.41 MPRDAGCLTDGDMNYDSSSRIENKRNHQWFMDGSAQELFSSKKQALETVITRPVPGVPHMNVSPWENTSTFQSVPGPFTDRHFGSEAIRTINLVDSGITVGNVNMDIGRKEFENNFVNNPSVNLSMSQSIEDSSSSLNFGGIRKVKVNQVRDLDVGMPASLGHAYSRGDNCTVPVGTTFNKNHESAISLGHYNSRDENGISVGPAYHKTDDNFISMGHAFSKGDGNFITIGHNYSKGDNSILSMSQPFVKEDDSFISMGQSYEKAEGNIISFGTSYNKGHDNFISMGPTYSKAGDTFISMASSYNKGNEDSLSMGPTYDKVNSDIVHEGPKYDKGDSGAVSMAHNYHKDESNTISFGGFDDENVANNPSGGIISSYDLLMANQASAQVSEMPTLRDSVDPNVEVNINNATKFDVKIDTSSKNKEPRMTKKASPNSFPSNVKSLLSTGMLDEVPVKYVSWSREKNLKGIIKGTGYLCSCDNCNHAKALNAYEFERHAGCKTKHPNNHIYFENGKTIYAVVQELKNTPQELLFDAIQNVTGSPINQKNFRIWKASYQAATLELQRIYGNDEIIRTS 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 40387145 40393159 + Sed0014441.1 Sed07g2462 721326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2462 574 PANTHER AUTOIMMUNE REGULATOR 5 555 - GO:0000977(PANTHER)|GO:0003682(PANTHER)|GO:0005634(PANTHER)|GO:0042393(PANTHER)|GO:0045944(PANTHER)
Sed07g2462 574 Pfam Tify domain binding domain 467 522 IPR032308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g2462 Sed-Chr7:40387145 Sed07g2465 Sed-Chr7:40387145 2.60E-230 dispersed
Sed07g2462 Sed-Chr7:40387145 Sed07g2463 Sed-Chr7:40387145 2.60E-230 tandem
Sed04g2818 Sed-Chr4:40121698 Sed07g2462 Sed-Chr7:40387145 8.40E-176 wgd
Sed05g2940 Sed-Chr5:40260929 Sed07g2462 Sed-Chr7:40387145 4.30E-74 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2462 - - - 0.0