Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2463 ATGTCTTTCCAGCATAAAAGCTTTTGGATGCCTAGGGATGCTGGATGTTTAACTGATGGAGACATGAACTATGATAGCTCTTCAAGAATTGAAAACAAGCGTAACCATCAATGGTTTATGGATGGAAGTGCACAGGAGCTATTCAGTAGCAAGAAACAAGCGTTAGAAACTGTAATTACTAGACCTGTTCCAGGAGTTCCACACATGAATGTTTCTCCCTGGGAAAACACTTCAACTTTTCAGTCAGTCCCAGGGCCCTTCACTGATCGCCACTTTGGCTCAGAGGCAATAAGAACTATCAATTTGGTTGATAGTGGTATCACTGTTGGAAATGTAAATATGGACATCGGAAGAAAGGAGTTCGAGAATAATTTTGTAAACAACCCGTCAGTTAACTTGTCCATGTCTCAATCCATTGAGGATTCCTCATCATCCCTCAATTTTGGTGGAATTAGAAAAGTTAAAGTTAATCAAGTCAGGGATCTCGACGTTGGCATGCCTGCCTCTTTGGGGCATGCCTATAGCAGGGGCGATAACTGTACAGTTCCAGTGGGTACAACATTCAACAAAAATCATGAGAGTGCCATATCATTAGGCCATTATAATAGTAGAGATGAGAATGGCATCTCAGTTGGCCCTGCATATCACAAGACAGATGACAATTTTATTTCAATGGGTCATGCTTTCAGCAAGGGTGATGGAAATTTTATTACAATTGGTCATAACTATAGCAAGGGAGACAATAGCATCCTATCAATGAGTCAGCCTTTTGTCAAGGAGGATGACTCTTTTATTTCCATGGGTCAGTCTTATGAGAAGGCAGAAGGCAATATCATTTCTTTTGGTACTTCCTACAATAAAGGGCATGATAATTTTATCTCAATGGGGCCAACCTATAGTAAGGCAGGGGATACTTTCATTTCAATGGCTTCCTCCTACAATAAGGGAAATGAGGATAGCTTATCAATGGGTCCAACCTATGACAAGGTGAACTCTGACATTGTACATGAGGGCCCTAAATATGACAAAGGAGATTCTGGTGCCGTGTCTATGGCACACAACTATCATAAAGATGAGAGTAATACGATATCCTTTGGAGGTTTTGATGATGAGAATGTGGCAAATAATCCTTCTGGTGGGATCATTAGCAGTTACGACTTGTTGATGGCTAATCAGGCTTCTGCCCAAGTATCAGAAATGCCAACCCTGAGAGATTCCGTTGATCCAAATGTGGAAGTAAACATTAACAATGCCACAAAATTTGATGTCAAGATTGACACGAGTTCCAAGAATAAAGAGCCTAGGATGACTAAGAAGGCGTCGCCAAATAGCTTCCCTTCAAATGTTAAAAGTTTGCTCTCAACTGGTATGCTTGATGAGGTTCCTGTGAAATATGTTTCTTGGTCACGGGAGAAAAATCTCAAGGGAATTATAAAAGGGACTGGATATTTGTGCAGCTGTGACAACTGCAATCATGCTAAGGCTCTCAATGCTTATGAATTTGAGAGGCATGCTGGCTGCAAAACCAAACATCCAAATAATCACATTTATTTTGAGAATGGTAAAACTATCTATGCTGTCGTTCAAGAGCTAAAGAATACCCCTCAGGAGTTGCTATTTGATGCAATTCAGAATGTGACTGGCTCTCCCATTAATCAGAAGAATTTTCGTATTTGGAAAGCATCTTATCAAGCTGCCACCCTTGAACTCCAGCGTATTTATGGAAATGACGAAATAATTAGAACTTCTTGA 1752 40.35 MSFQHKSFWMPRDAGCLTDGDMNYDSSSRIENKRNHQWFMDGSAQELFSSKKQALETVITRPVPGVPHMNVSPWENTSTFQSVPGPFTDRHFGSEAIRTINLVDSGITVGNVNMDIGRKEFENNFVNNPSVNLSMSQSIEDSSSSLNFGGIRKVKVNQVRDLDVGMPASLGHAYSRGDNCTVPVGTTFNKNHESAISLGHYNSRDENGISVGPAYHKTDDNFISMGHAFSKGDGNFITIGHNYSKGDNSILSMSQPFVKEDDSFISMGQSYEKAEGNIISFGTSYNKGHDNFISMGPTYSKAGDTFISMASSYNKGNEDSLSMGPTYDKVNSDIVHEGPKYDKGDSGAVSMAHNYHKDESNTISFGGFDDENVANNPSGGIISSYDLLMANQASAQVSEMPTLRDSVDPNVEVNINNATKFDVKIDTSSKNKEPRMTKKASPNSFPSNVKSLLSTGMLDEVPVKYVSWSREKNLKGIIKGTGYLCSCDNCNHAKALNAYEFERHAGCKTKHPNNHIYFENGKTIYAVVQELKNTPQELLFDAIQNVTGSPINQKNFRIWKASYQAATLELQRIYGNDEIIRTS 583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 40387145 40393159 + Sed0014441.2 Sed07g2463 721327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2463 583 PANTHER AUTOIMMUNE REGULATOR 6 564 - GO:0000977(PANTHER)|GO:0003682(PANTHER)|GO:0005634(PANTHER)|GO:0042393(PANTHER)|GO:0045944(PANTHER)
Sed07g2463 583 Pfam Tify domain binding domain 476 531 IPR032308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g2818 Sed-Chr4:40121698 Sed07g2463 Sed-Chr7:40387145 2.70E-182 dispersed
Sed04g2819 Sed-Chr4:40121698 Sed07g2463 Sed-Chr7:40387145 2.70E-182 dispersed
Sed05g2940 Sed-Chr5:40260929 Sed07g2463 Sed-Chr7:40387145 1.20E-76 dispersed
Sed07g2463 Sed-Chr7:40387145 Sed07g2465 Sed-Chr7:40387145 2.90E-237 dispersed
Sed07g2462 Sed-Chr7:40387145 Sed07g2463 Sed-Chr7:40387145 2.60E-230 tandem
Sed07g2463 Sed-Chr7:40387145 Sed07g2464 Sed-Chr7:40387145 1.70E-224 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2463 - - - 0.0