Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2466 ATGCCTAGGGATGCTGGATGTTTAACTGATGGAGACATGAACTATGATAGCTCTTCAAGAATTGAAAACAAGCGTAACCATCAATGGTTTATGGATGGAAGTGCACAGGAGCTATTCAGTAGCAAGAAACAAGCGTTAGAAACTGTAATTACTAGACCTGTTCCAGGAGTTCCACACATGAATGTTTCTCCCTGGGAAAACACTTCAACTTTTCAGTCAGTCCCAGGGCCCTTCACTGATCGCCACTTTGGCTCAGAGGCAATAAGAACTATCAATTTGGTTGATAGTGGTATCACTGTTGGAAATGTAAATATGGACATCGGAAGAAAGGAGTTCGAGAATAATTTTGTAAACAACCCGTCAGTTAACTTGTCCATGTCTCAATCCATTGAGGATTCCTCATCATCCCTCAATTTTGGTGGAATTAGAAAAGTTAAAGTTAATCAAGTCAGGGATCTCGACGTTGGCATGCCTGCCTCTTTGGGGCATGCCTATAGCAGGGGCGATAACTGTACAGTTCCAGTGGGTACAACATTCAACAAAAATCATGAGAGTGCCATATCATTAGGCCATTATAATAGTAGAGATGAGAATGGCATCTCAGTTGGCCCTGCATATCACAAGACAGATGACAATTTTATTTCAATGGGTCATGCTTTCAGCAAGGGTGATGGAAATTTTATTACAATTGGTCATAACTATAGCAAGGGAGACAATAGCATCCTATCAATGAGTCAGCCTTTTGTCAAGGAGGATGACTCTTTTATTTCCATGGGTCAGTCTTATGAGAAGGCAGAAGGCAATATCATTTCTTTTGGTACTTCCTACAATAAAGGGCATGATAATTTTATCTCAATGGGGCCAACCTATAGTAAGGCAGGGGATACTTTCATTTCAATGGCTTCCTCCTACAATAAGGGAAATGAGGATAGCTTATCAATGGGTCCAACCTATGACAAGGTGAACTCTGACATTGTACATGAGGGCCCTAAATATGACAAAGGAGATTCTGGTGCCGTGTCTATGGCACACAACTATCATAAAGATGAGAGTAATACGATATCCTTTGGAGGTTTTGATGATGAGAATGTGGCAAATAATCCTTCTGGTGGGATCATTAGCAGTTACGACTTGTTGATGGCTAATCAGGCTTCTGCCCAAGTATCAGAAATGCCAACCCTGAGAGATTCCGTTGATCCAAATGTGGAAGTAAACATTAACAATGCCACAAAATTTGATGTCAAGATTGACACGAGTTCCAAGAATAAAGAGCCTAGGATGACTAAGAAGGCGTCGCCAAATAGCTTCCCTTCAAATGTTAAAAGTTTGCTCTCAACTGGTATGCTTGATGAGGTTCCTGTGAAATATGTTTCTTGGTCACGGGAGAAAAATCTCAAGGGAATTATAAAAGGGACTGGATATTTGTGCAGCTGTGACAACTGCAATCATGCTAAGGCTCTCAATGCTTATGAATTTGAGAGGCATGCTGGCTGCAAAACCAAACATCCAAATAATCACATTTATTTTGAGAATGGTAAAACTATCTATGCTGTCGTTCAAGAGCTAAAGAATACCCCTCAGGAGTTGCTATTTGATGCAATTCAGAATGTGACTGGCTCTCCCATTAATCAGAAGAATTTTCGTATTTGGAAAGCATCTTATCAAGCTGCCACCCTTGAACTCCAGCGTATTTATGGAAATGACGAAATAATTAGAACTTCTTGA 1725 40.41 MPRDAGCLTDGDMNYDSSSRIENKRNHQWFMDGSAQELFSSKKQALETVITRPVPGVPHMNVSPWENTSTFQSVPGPFTDRHFGSEAIRTINLVDSGITVGNVNMDIGRKEFENNFVNNPSVNLSMSQSIEDSSSSLNFGGIRKVKVNQVRDLDVGMPASLGHAYSRGDNCTVPVGTTFNKNHESAISLGHYNSRDENGISVGPAYHKTDDNFISMGHAFSKGDGNFITIGHNYSKGDNSILSMSQPFVKEDDSFISMGQSYEKAEGNIISFGTSYNKGHDNFISMGPTYSKAGDTFISMASSYNKGNEDSLSMGPTYDKVNSDIVHEGPKYDKGDSGAVSMAHNYHKDESNTISFGGFDDENVANNPSGGIISSYDLLMANQASAQVSEMPTLRDSVDPNVEVNINNATKFDVKIDTSSKNKEPRMTKKASPNSFPSNVKSLLSTGMLDEVPVKYVSWSREKNLKGIIKGTGYLCSCDNCNHAKALNAYEFERHAGCKTKHPNNHIYFENGKTIYAVVQELKNTPQELLFDAIQNVTGSPINQKNFRIWKASYQAATLELQRIYGNDEIIRTS 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 40387145 40393159 + Sed0014441.5 Sed07g2466 721330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2466 574 PANTHER AUTOIMMUNE REGULATOR 5 555 - GO:0000977(PANTHER)|GO:0003682(PANTHER)|GO:0005634(PANTHER)|GO:0042393(PANTHER)|GO:0045944(PANTHER)
Sed07g2466 574 Pfam Tify domain binding domain 467 522 IPR032308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g2464 Sed-Chr7:40387145 Sed07g2466 Sed-Chr7:40387145 3.00E-218 dispersed
Sed07g2465 Sed-Chr7:40387145 Sed07g2466 Sed-Chr7:40387145 5.30E-231 tandem
Sed07g2466 Sed-Chr7:40387145 Sed07g2467 Sed-Chr7:40387145 2.60E-230 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2466 - - - 0.0