Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2468 ATGGAGAGGTTTTGGAGTTTGGCAAAACCATATTTCATGGTTATTTTCCTGCAGCTGGGGGCTGCAGGGATGAATGTCCTAGCGAAAGCGGCACTCAACCACGGCATGAGCCATTATATCTTTCCGGTTTATCGTCAACTCGTAGCCACGCTCGTGATGGCTCCTTTTGCCCTGATAATCGAGAGGAGAGGAAGGCCGAGGATGACGTGGTCGTTGTTGTGGAAGATTGTTTTACTAGGTTTTTTAGAGCCAGTAATTGGTCAAAACATGTACTATATTGGTATGAGTTTAACAACAGCAACATTTACGGCGGCCATGAGCAATGTTCTACCAGCTTTTACTTTTGTAATGGCTTGTGTTTTCAGGCTTGAGAAAGTGAATATTTTGGAAAGGAGAAGCCAAGCAAAAATCTTAGGAACCATAGTTACAATTGGAGGAGCCATGATAATGACCTTCATAACTGGACCAACACTGAATCTACCATGGACCAAACCCAACCAACACTCTGTTTCTAATTCAAGTGGCTCTTCAAATCACCAAAGCCCAATCCTAGGCTCCCTCATAATTGCAACTGGCTGCATTTCCTGGTCAGGCTTCATGATCCTTCAGGTGATTACATTGAGATCGTACACGGCGGAGTTGTCGCTTACGACATTGATATGCTTGGTGGGCACCATTGGAGACTCTGTGGTGGCTTTGATTGTTGAAAGGGGAAATCCCAAGGCTTGGTCTTTGCACTTTGACTCTGAACTTCTAACTGTTGTTTATTCTGGAGTAATATGTTCTGCCTTAACTTATTATATTCAAGGAATAGTGACTCAAGTAAAAGGGCCTGTTTTTGTCACTGCATTCAATCCCCTTTGCATGGTTTTTGTTGCAATCATGAGTTCCTTGTTCTTATCTGAGATAATGTTTTTGGGCAGGATTATTGGAGCTGTTGTCATAATCATTGGCCTATATCTTGTTTTGTGGGGAAAAAGCAAAGATCAAATTTCAGATAAGATAGCACCTGAAAACAATGACGCTTCCACGAGTGAAAGAGTGTTAGCGTAA 1053 42.45 MERFWSLAKPYFMVIFLQLGAAGMNVLAKAALNHGMSHYIFPVYRQLVATLVMAPFALIIERRGRPRMTWSLLWKIVLLGFLEPVIGQNMYYIGMSLTTATFTAAMSNVLPAFTFVMACVFRLEKVNILERRSQAKILGTIVTIGGAMIMTFITGPTLNLPWTKPNQHSVSNSSGSSNHQSPILGSLIIATGCISWSGFMILQVITLRSYTAELSLTTLICLVGTIGDSVVALIVERGNPKAWSLHFDSELLTVVYSGVICSALTYYIQGIVTQVKGPVFVTAFNPLCMVFVAIMSSLFLSEIMFLGRIIGAVVIIIGLYLVLWGKSKDQISDKIAPENNDASTSERVLA 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 40394864 40398876 - Sed0006828.1 Sed07g2468 721332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2468 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 152 - -
Sed07g2468 350 PANTHER WAT1-RELATED PROTEIN 13 338 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Sed07g2468 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 328 - -
Sed07g2468 350 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020(InterPro)
Sed07g2468 350 Pfam EamA-like transporter family 11 151 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g2468 Sed-Chr7:40394864 Sed07g2471 Sed-Chr7:40463867 2.40E-130 dispersed
Sed07g2468 Sed-Chr7:40394864 Sed07g2469 Sed-Chr7:40415188 2.10E-126 tandem
Sed14g0458 Sed-Chr14:4628729 Sed07g2468 Sed-Chr7:40394864 2.60E-98 wgd
Sed03g0062 Sed-Chr3:378573 Sed07g2468 Sed-Chr7:40394864 4.40E-96 wgd
Sed04g2820 Sed-Chr4:40128616 Sed07g2468 Sed-Chr7:40394864 1.70E-121 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2468 - - - 0.0