Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed07g2468 | ATGGAGAGGTTTTGGAGTTTGGCAAAACCATATTTCATGGTTATTTTCCTGCAGCTGGGGGCTGCAGGGATGAATGTCCTAGCGAAAGCGGCACTCAACCACGGCATGAGCCATTATATCTTTCCGGTTTATCGTCAACTCGTAGCCACGCTCGTGATGGCTCCTTTTGCCCTGATAATCGAGAGGAGAGGAAGGCCGAGGATGACGTGGTCGTTGTTGTGGAAGATTGTTTTACTAGGTTTTTTAGAGCCAGTAATTGGTCAAAACATGTACTATATTGGTATGAGTTTAACAACAGCAACATTTACGGCGGCCATGAGCAATGTTCTACCAGCTTTTACTTTTGTAATGGCTTGTGTTTTCAGGCTTGAGAAAGTGAATATTTTGGAAAGGAGAAGCCAAGCAAAAATCTTAGGAACCATAGTTACAATTGGAGGAGCCATGATAATGACCTTCATAACTGGACCAACACTGAATCTACCATGGACCAAACCCAACCAACACTCTGTTTCTAATTCAAGTGGCTCTTCAAATCACCAAAGCCCAATCCTAGGCTCCCTCATAATTGCAACTGGCTGCATTTCCTGGTCAGGCTTCATGATCCTTCAGGTGATTACATTGAGATCGTACACGGCGGAGTTGTCGCTTACGACATTGATATGCTTGGTGGGCACCATTGGAGACTCTGTGGTGGCTTTGATTGTTGAAAGGGGAAATCCCAAGGCTTGGTCTTTGCACTTTGACTCTGAACTTCTAACTGTTGTTTATTCTGGAGTAATATGTTCTGCCTTAACTTATTATATTCAAGGAATAGTGACTCAAGTAAAAGGGCCTGTTTTTGTCACTGCATTCAATCCCCTTTGCATGGTTTTTGTTGCAATCATGAGTTCCTTGTTCTTATCTGAGATAATGTTTTTGGGCAGGATTATTGGAGCTGTTGTCATAATCATTGGCCTATATCTTGTTTTGTGGGGAAAAAGCAAAGATCAAATTTCAGATAAGATAGCACCTGAAAACAATGACGCTTCCACGAGTGAAAGAGTGTTAGCGTAA | 1053 | 42.45 | MERFWSLAKPYFMVIFLQLGAAGMNVLAKAALNHGMSHYIFPVYRQLVATLVMAPFALIIERRGRPRMTWSLLWKIVLLGFLEPVIGQNMYYIGMSLTTATFTAAMSNVLPAFTFVMACVFRLEKVNILERRSQAKILGTIVTIGGAMIMTFITGPTLNLPWTKPNQHSVSNSSGSSNHQSPILGSLIIATGCISWSGFMILQVITLRSYTAELSLTTLICLVGTIGDSVVALIVERGNPKAWSLHFDSELLTVVYSGVICSALTYYIQGIVTQVKGPVFVTAFNPLCMVFVAIMSSLFLSEIMFLGRIIGAVVIIIGLYLVLWGKSKDQISDKIAPENNDASTSERVLA | 350 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 40394864 | 40398876 | - | Sed0006828.1 | Sed07g2468 | 721332 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed07g2468 | 350 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 44 | 152 | - | - | |
Sed07g2468 | 350 | PANTHER | WAT1-RELATED PROTEIN | 13 | 338 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) | |
Sed07g2468 | 350 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 247 | 328 | - | - | |
Sed07g2468 | 350 | Pfam | EamA-like transporter family | 184 | 323 | IPR000620 | GO:0016020(InterPro) | |
Sed07g2468 | 350 | Pfam | EamA-like transporter family | 11 | 151 | IPR000620 | GO:0016020(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed07g2468 | Sed-Chr7:40394864 | Sed07g2471 | Sed-Chr7:40463867 | 2.40E-130 | dispersed | |
Sed07g2468 | Sed-Chr7:40394864 | Sed07g2469 | Sed-Chr7:40415188 | 2.10E-126 | tandem | |
Sed14g0458 | Sed-Chr14:4628729 | Sed07g2468 | Sed-Chr7:40394864 | 2.60E-98 | wgd | |
Sed03g0062 | Sed-Chr3:378573 | Sed07g2468 | Sed-Chr7:40394864 | 4.40E-96 | wgd | |
Sed04g2820 | Sed-Chr4:40128616 | Sed07g2468 | Sed-Chr7:40394864 | 1.70E-121 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed07g2468 | - | - | - | 0.0 |