Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2470 ATGGAGGGTTTTGTGAGGCTTTTTGGCTTGGCAAAACCATATGTTGGAGTTGTTTTTGTGCAATTTGGTTTTGCTGGAATGTCTATTCTTGCAAAGTCGGCTTTGAATAACGGGACGAGCCCGTATGTCTTTGCGGTTTATCGTCAAGGGATTGCTACTCTTGTTATGGCTCCTTTCGCCATAATCTTCGAAAGGAAAATGAGGCCGAAGATGACCATTCCGTTGCTGTTGAAGATTGTGATATTGGGTTTCTTAGAGCCGGTAATCGATCAGAACTTATACTTTACTGCTATGAAGTTCACAACAGCAACCTTTGCAGCAGCCATGTGCAATATTCTACCAGCTTTTGCTTTTCTCATGGCTTGGGCTTGCAGGCTTGAAAAAGTGAATATTTTGAAGAGGGGAAGCCAAGCAAAAATGGTAGGAACCATAGTGACTGTTGGAGGAGCCATGATAATGACCTTCATAACTGGACCAATGCTGAATCTACCATGGACCAAACCCAACCATGACTCTGCTTCTTCAAGTGGTTCTGTAAGCCATCAAAACCAACTCTTAGGCTCCCTCATGTTGGTAACTGGCTGCCTTTGTTGGTCAGCCTTCATCATTATTCAGGCGATTACGTTGAAATCGTACCCGGCGGAGATGTCGCTTACTGTGTTGATATGCTTGGTGGGAACCATTGGAGACTCAGGGGTGGCTTTGTTCATTGAAAGGGGAAACCCCACTGCTTGGTCTTTGCACTTTGACACTCAACTCCTAGCTGTTGTTTATGCTGGAATAATATGTACAGGGGCAACTTATTATATTCAAGGAGTGGTGATGCAAGCAAAAGGACCTGTCTTTTTCTCTGCATTCAATCCTTTGTGCATGATTCTAGTAGCAATCATGAGCTCCTTCGTCTTGTCTGAGATAATGTTTTTGGGGAGGATCATTGGAGCAGTGGTCATAATCATTGGCCTGTATCTTGTTTTATGGGGCAAAAACAAAGATAAGATTTCAGTTAAATCAGATTGTGATAAGATAACACCTTCTGAACAACAAATGATTGGAAGCAATGAGATTTTCAAGATTGTCCAATCAAATGAACATTTCTTGGCGCTTGATGTTTCCAAATAA 1119 42.27 MEGFVRLFGLAKPYVGVVFVQFGFAGMSILAKSALNNGTSPYVFAVYRQGIATLVMAPFAIIFERKMRPKMTIPLLLKIVILGFLEPVIDQNLYFTAMKFTTATFAAAMCNILPAFAFLMAWACRLEKVNILKRGSQAKMVGTIVTVGGAMIMTFITGPMLNLPWTKPNHDSASSSGSVSHQNQLLGSLMLVTGCLCWSAFIIIQAITLKSYPAEMSLTVLICLVGTIGDSGVALFIERGNPTAWSLHFDTQLLAVVYAGIICTGATYYIQGVVMQAKGPVFFSAFNPLCMILVAIMSSFVLSEIMFLGRIIGAVVIIIGLYLVLWGKNKDKISVKSDCDKITPSEQQMIGSNEIFKIVQSNEHFLALDVSK 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 40424624 40431461 - Sed0008254.1 Sed07g2470 721334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2470 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 154 - -
Sed07g2470 372 Pfam EamA-like transporter family 16 153 IPR000620 GO:0016020(InterPro)
Sed07g2470 372 Pfam EamA-like transporter family 186 325 IPR000620 GO:0016020(InterPro)
Sed07g2470 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 330 - -
Sed07g2470 372 PANTHER WAT1-RELATED PROTEIN 16 338 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g2470 Sed-Chr7:40424624 Sed07g2472 Sed-Chr7:40463867 3.10E-115 dispersed
Sed07g2469 Sed-Chr7:40415188 Sed07g2470 Sed-Chr7:40424624 1.80E-160 tandem
Sed07g2470 Sed-Chr7:40424624 Sed07g2471 Sed-Chr7:40463867 3.00E-155 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2470 - - - 0.0