Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2472 ATGAAGTTCACAACAGCAACTTTTACAATTGCATTGAGCAATGTTCTACCAGCTTTTGTTTTCCTCATGGCTTGGTTTTTCAGGCTTGAGAAAGTGAATATTTTGAAAAGGGAAAGCCAAGCAAAAATCCTAGGAACCATTATAACAATTGGAGGAGCCATGATTATGACCTTCATAAGTGGACCCAAATTGAATTTACCATGGACCAATACCAACCATCACTCTGTTTCTAATTCAAATGGTTCTATGAATCCTCTCACCCAACTCAAGGGCTCCCTCATGATTACAACTGGCTGCCTTTCATGGGCAGCCTTTATCATTCTTCAGGCGATTACGTTGAAATCGTACTCGGCGGAGTTGTCGCTTACGGCATTGATATGCTTGGTGGGCGGCATTGGAGACTTAGGGGTGGCTTTGATCATTGAAAGGGGAAACCCCACTGCTTGGTCTTTGCACTTTGACACTCAACTTCTAGCTATTGTTTATGCTGGAATAATATGTACAGGACTAGCTTATTATATTCAAGGAGTGGTGCTACAAGCAAAAGGGCCTGTTTTTTTCACAGCATTCAATCCTCTGTGCATGATTCTAACTGCAATCATGAGCTCCTTTATATTGTCTGAGATAATGGTTTTGGGCAGAGTTATTGGAGCAGGTGTCATAATCATTGGCTTGTACCTTGTTTTGTGGGGCAAAAGCAAAGATCAAATTTCAATTAAATCAGAGTGTGATAAGATAACACATTATGAGCAACAAATGACTGGAAACAATGAGGCTTCCAAGACTGTTCAATCAAATGAACAATGTGTTGTGCTTGATGTTGCCAAATAG 831 40.43 MKFTTATFTIALSNVLPAFVFLMAWFFRLEKVNILKRESQAKILGTIITIGGAMIMTFISGPKLNLPWTNTNHHSVSNSNGSMNPLTQLKGSLMITTGCLSWAAFIILQAITLKSYSAELSLTALICLVGGIGDLGVALIIERGNPTAWSLHFDTQLLAIVYAGIICTGLAYYIQGVVLQAKGPVFFTAFNPLCMILTAIMSSFILSEIMVLGRVIGAGVIIIGLYLVLWGKSKDQISIKSECDKITHYEQQMTGNNEASKTVQSNEQCVVLDVAK 276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 40463867 40470671 - Sed0002086.2 Sed07g2472 721336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2472 276 SUPERFAMILY Multidrug resistance efflux transporter EmrE 148 234 - -
Sed07g2472 276 PANTHER WAT1-RELATED PROTEIN 1 247 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Sed07g2472 276 Pfam EamA-like transporter family 90 229 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g2470 Sed-Chr7:40424624 Sed07g2472 Sed-Chr7:40463867 3.10E-115 dispersed
Sed07g2472 Sed-Chr7:40463867 Sed14g0458 Sed-Chr14:4628729 1.90E-69 dispersed
Sed07g2471 Sed-Chr7:40463867 Sed07g2472 Sed-Chr7:40463867 5.60E-149 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2472 - - - 0.0