Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2521 ATGGGCAAATCATTTGAAGGAGATTTTTCGGCTGCGTCTGAACGACATGTCAATATGCTTAAACAAGTTCTTACCACTAGTGATGCATCCAAATCTCTGGTGTATAGCTACCACCGGAGCTTCAGTGGCTTTGCAGCCAGGCTCAATGAGGACGAAGCTCGGAAACTTGCCGAGATGGATGAAGTTGTGTCTGTGTTTCCAAGTGAAAAGAAACATCTTCACACGACAAGGTCATGGGACTTCATGGGATTATTCGAACGAGCACGACGAACCAGTTTCGAGTCCGATATGGTCATCGGAATGTTGGATACTGGGATTTGGCCAGAATCGGAAAGCTTTTCCGACGAAGGCTTTGGTCCACCGCCGGCTAAATGGAAAGGCAAATGCCAACCCTCTTCTAATTTCACTTGCAACAATAAAATAATCGGAGGTCGATTTTTCCGGAGCGAACCTTTCTTCGGCGAAGGCGACATTCTTTCTCCAAGAGATACAGAAGGCCATGGAACCCACACCTCATCCACCGCCGCCGGCAATCCCGTCACCGGCGCCAGCCTCTTCGGCCTCGCCGCCGGCACCTCTCGCGGCGGCGCCCCTTCCGCCCGCATCGCCGTCTACAAGATCTGCTGGTCCGACGGCTGCTTCGACGCCGACATCCTCGCCGCCTTCAACAACGCCATCGCCGACGGCGTCGACATCATCTCCATCTCCGTCGGAGGCTCCATCGCCGTTGATTACTTCAACGATTCAATTGCTATTGGGGCTTTTCACGCCATGAAGAATGGAATTCTGACTTCCAATTCCGGCGGGAATTCGGGTCCTACCCTCGGTAGCATTTCCAATGTCTCTCCATGGTCGCTATCCGTGGCTGCTAGCACCATTGATAGGAAGATTGTGACTAATGTGAAGTTGGGTAATGGAGAATCCTTTGTGGGGGTCTCTGTGAACACCTTCCAACTTGGAGATGACTTGATTCCACTAATTTATGCTGGCGATGCTCCTAATATCACTGCAGGTTTCAATGGATCATTATCCAGGTTCTGCTTCCCGGGTTCTTTGGACATGAACCTAGTTCAAGGGAAGATTGTTTTATGCGATGAGATTAGTGATGGAGCATCATTTCTGGATAGTGGTGTGGCTGGCACAATAATGCAAGATGGTACGGTCCAAGATGTGGCATTTCTTTTCCCGCTACCTGTATCTATCTTAGACTTGAACGCTGGAAATAATGTTTTCGAGTACCTGAGATCAACCAGTAATCCGGTGGCTATCATAGAGAAGAGTACTACCATTGAGGACCTAGTAGCTCCAAGTGTTGTTTCCTTCTCATCAAGGGGGCCTAACCTAATTACACTGGACATTCTCAAGCCTGATTTAGCAGCACCAGGAGTGGATATACTAGCATCTTGGTCTGAAGCTACGTCAATTACTGGTTCAATAGGGGATAACAGAATATCTCCATTTAACATAATCTCTGGCACATCCATGGCTTGTCCACATGCGACCGGAGCAGCTGCATATGTCAAATCTTTCCACCCAACTTGGTCTCCAGCTGCTATCAAGTCTGCACTTATGACAACAGCTTTTCCTATGGCTTCAAAGGTAAACACCGATGCCGAGTTTGCATTTGGAGCAGGTCACATAAATCCAGTAACTGCCATTAACCCTGGTTTAGTCTATGATGCCGAAGAGATTGATTACGTAAAGTTCTTATGCGGGCAGCGATATAGCACTGCACATCTTCGTCTCGTTACCGGTGACCAAAGCAACTGTTCGGCTGTGACAAAAACAGCTGCTTCCGATCTAAATTATCCATCTTTTGCTCTATTGATCACATCCCCGAGATCGGTTACTCGTGTGTACCACAGGACTGTCACGAATGTTGGGCTGCCAGTGTCAACATATAAAGCAGTTATTCAAGCTTCACCCGGGCTCAAAGTTACAGTACGTCCTGCTACTCTTTCTTTCAGTTCTCTTGGACAAAAGATATCTTTCGTCGTGAGTGTTAAAGCAAACCCTGGAGGGAATGTGCTTTCTGGTAGCTTAACCTGGGATGATGGAGTGCATCTGGTGAGGAGTCCCATTGTTGCATTTACTATTCCATCATGA 2106 47.96 MGKSFEGDFSAASERHVNMLKQVLTTSDASKSLVYSYHRSFSGFAARLNEDEARKLAEMDEVVSVFPSEKKHLHTTRSWDFMGLFERARRTSFESDMVIGMLDTGIWPESESFSDEGFGPPPAKWKGKCQPSSNFTCNNKIIGGRFFRSEPFFGEGDILSPRDTEGHGTHTSSTAAGNPVTGASLFGLAAGTSRGGAPSARIAVYKICWSDGCFDADILAAFNNAIADGVDIISISVGGSIAVDYFNDSIAIGAFHAMKNGILTSNSGGNSGPTLGSISNVSPWSLSVAASTIDRKIVTNVKLGNGESFVGVSVNTFQLGDDLIPLIYAGDAPNITAGFNGSLSRFCFPGSLDMNLVQGKIVLCDEISDGASFLDSGVAGTIMQDGTVQDVAFLFPLPVSILDLNAGNNVFEYLRSTSNPVAIIEKSTTIEDLVAPSVVSFSSRGPNLITLDILKPDLAAPGVDILASWSEATSITGSIGDNRISPFNIISGTSMACPHATGAAAYVKSFHPTWSPAAIKSALMTTAFPMASKVNTDAEFAFGAGHINPVTAINPGLVYDAEEIDYVKFLCGQRYSTAHLRLVTGDQSNCSAVTKTAASDLNYPSFALLITSPRSVTRVYHRTVTNVGLPVSTYKAVIQASPGLKVTVRPATLSFSSLGQKISFVVSVKANPGGNVLSGSLTWDDGVHLVRSPIVAFTIPS 701
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 40895375 40902391 + Sed0008548.1 Sed07g2521 721385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2521 701 Gene3D - 570 698 - -
Sed07g2521 701 CDD Peptidases_S8_3 71 527 IPR034197 -
Sed07g2521 701 Pfam Subtilase family 96 545 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed07g2521 701 ProSiteProfiles Serine proteases, subtilase domain profile. 78 553 - -
Sed07g2521 701 Gene3D Peptidase S8/S53 domain 96 566 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed07g2521 701 FunFam Subtilisin-like protease SBT1.5 96 307 - -
Sed07g2521 701 Pfam Fibronectin type-III domain 600 695 IPR041469 -
Sed07g2521 701 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 74 IPR037045 -
Sed07g2521 701 CDD PA_subtilisin_like 300 424 - -
Sed07g2521 701 SUPERFAMILY Subtilisin-like 78 554 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed07g2521 701 ProSitePatterns Serine proteases, subtilase family, serine active site. 492 502 IPR023828 -
Sed07g2521 701 Gene3D - 294 431 - -
Sed07g2521 701 PRINTS Subtilisin serine protease family (S8) signature 94 113 IPR015500 -
Sed07g2521 701 PRINTS Subtilisin serine protease family (S8) signature 491 507 IPR015500 -
Sed07g2521 701 PRINTS Subtilisin serine protease family (S8) signature 163 176 IPR015500 -
Sed07g2521 701 Pfam Peptidase inhibitor I9 8 74 IPR010259 -
Sed07g2521 701 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 695 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g2521 Sed-Chr7:40895375 Sed09g0258 Sed-Chr9:2064825 3.10E-225 dispersed
Sed07g2520 Sed-Chr7:40885756 Sed07g2521 Sed-Chr7:40895375 7.40E-230 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2521 - - - 0.0