Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2559 ATGGCTTCCACATATCGCGATCGGACGTCCGAGTTCCGGTCGCTGTCGGAGACGCTGAAGAAGATCGGCGGGGTTACCGCCGCCGTCCATCCACCTCAAAACGAACCATCGGCGTCCGTGCTCTCCGGATCGCCGCCATTTGCTCGATCTGATTTCAGCAAGAAGGCGTCTCGTATTGGATCGAGAATCCAAGAAACCTCTCAGAAGATCGCGAGGCTCGCTCAGCTGGCAAAAAGATCTTCGATGTTTGATGATCCAATCAGGGAAATACAGGAAATGACTGCTTTGATTAAGAATGATATTACATCATTGAATGTAGCTATCTCAGACTTGCAAACCATCCAAACAATGGAGATAACAGAGGGGAAATATTCAGAGGATAGAGTGGTTCATTCAACCGCTGTATGTGACGACCTGAAGAGTAAACTTATGGGAGCTACAAAACAACTTCAAGATGTGCTAACTACAAGAACGGAGAATATCAAGGCAAATGAGAGCCGGAGGCAAATATTTTCTGCAAATGCAACCAGAGAAAGTCCTTTTCAAAATCAAGCTAAAACTGTAACGCAACCTCCACCTTGGTCAAGTAATACATCTGGAAGTGCCCAATCATCATTGCTGTCATCAAATGGAGCTCAAGTTGGGGGTCAATTGAGTCAGACGAAGGTTAGCTGTGGAGAGCGCCCCGTCGCAGCAAATGGAAATGTCAATGTTACAGCAGGTGGTTCCTAG 732 46.86 MASTYRDRTSEFRSLSETLKKIGGVTAAVHPPQNEPSASVLSGSPPFARSDFSKKASRIGSRIQETSQKIARLAQLAKRSSMFDDPIREIQEMTALIKNDITSLNVAISDLQTIQTMEITEGKYSEDRVVHSTAVCDDLKSKLMGATKQLQDVLTTRTENIKANESRRQIFSANATRESPFQNQAKTVTQPPPWSSNTSGSAQSSLLSSNGAQVGGQLSQTKVSCGERPVAANGNVNVTAGGS 243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 41119183 41123798 + Sed0013961.2 Sed07g2559 721423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2559 243 MobiDBLite consensus disorder prediction 173 243 - -
Sed07g2559 243 Gene3D - 48 226 - -
Sed07g2559 243 MobiDBLite consensus disorder prediction 27 46 - -
Sed07g2559 243 SUPERFAMILY t-snare proteins 48 212 IPR010989 GO:0016020(InterPro)|GO:0016192(InterPro)
Sed07g2559 243 MobiDBLite consensus disorder prediction 173 226 - -
Sed07g2559 243 MobiDBLite consensus disorder prediction 32 46 - -
Sed07g2559 243 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 6 21 IPR021538 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g2893 Sed-Chr4:40590454 Sed07g2559 Sed-Chr7:41119183 4.40E-97 dispersed
Sed07g2558 Sed-Chr7:41119183 Sed07g2559 Sed-Chr7:41119183 7.50E-113 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2559 K08490 - csv:101213786 352.443