Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2562 ATGGCTTTTTTCTTCTTCCTCCTCCTCCTCTTTTCCTCTCTTTCCGCCTCTTTTCTCCTCCTCCTCCTCCTCCGCCGTCCGGCCAGAGTCCGGCGACTCCGCCTCCCGCCGGGAACTCTCGGCCTCCCCTTCCTGGGAGAGACCCTCCAGCTCATCTCCGCCTACAAGACCGAGAACCCCGAACCGTTCATCGACGACCGGGTCCGCCGGTTCGGCCCGGTCTTCACCACTCACTTGTTCGGCGAGCCGACGGTGTTCTCGGCCGACTGGGAGACGAACCGGTTCATTCTCCAGAACGAGGAGAAGCTTTTCGAGTGCAGCTACCCCGGTTCCATCTCCAACCTGCTTGGGAAGCACTCTTTGCTGCTTATGAAAGGGAGTTTGCACAAGAGAATGCATTCTCTGACCATGAGCTTTGCTAATTCTTCCATTATTCGGGATCATCTTTTGGTCGATGTGGACCGCTTAATTCGCCTTAATTTGGACTCCTGGACCGGCCGGATCCTCCTCATGGAGGAGGCCAAAAAGATTACGTTTGAGTTAGCAGTGAAGCAATTAATGAGTTTTGATCCGTGTGAATGGACTCAAAATCTCATGAACCAATATCTTCTTGTCATTGAAGGTTTTTTTACCGTCCCTCTCCCGCTTTTATCCTCCACTTACCGTGGAGCCATCCAGGCACGGAAAAAAGTAGCGGAGCAATTAGGGGCGGTGGTGCGGCGGCGGAGGAAAGAGAGTGAGGGCGGAGCAAGGAAGAAGGACATGCTCGGAGCGTTGCTCGCCGGAGAAGATGCACTTTCCGACGAGCAAATAGTAGATTTTTTGTTGGCTTTATTGGTGGCGGGATATGAAACGACGTCAACCACCATGACCCTCGCCGTTAAGTTTTTGACGGAGACGCCGCTGGCTTTGGCCCAATTACAGGAAGAGCATGAGCAAATCAAAGCAAGGAGGAAGGAATCAAACCAACACCTCCAATGGAATGATTACAAGTCCATGCCTTTCACCCAATGTGTTGTCAATGAAACATTAAGAATTGCCAACATAATCAGTGGAGTTTTTAGGAGAGCAATGACAGATGTAAATATCAAAGGATATACAATTCCAAAGGGATGGAAGGTTTTTGCATCATTTCGAGCAGTACATTTGGACCATGATCATTTCAAAGATGCTCGCACTTTCAACCCATGGAGATGGCAACAGAATAGCTCGGGGTCGACGACGGTAAATGCTTTTACACCCTTCGGGGGAGGACCGAGGTTGTGCCCCGGTTACGAGCTAGCGAGAGTAGAACTCTCAGTTTTCCTTCATCATCTTGTCACCCAATTCAGTTGGGTTCCAGCAGAAGATGACAAGTTGGTATTTTTCCCAACTACAAGAACACAAAAGCGATATCCTATCGTCGTGACGCGTAAGAACGAAGCTAGACAATGTAAAGACAGTCATCCATGA 1452 49.93 MAFFFFLLLLFSSLSASFLLLLLLRRPARVRRLRLPPGTLGLPFLGETLQLISAYKTENPEPFIDDRVRRFGPVFTTHLFGEPTVFSADWETNRFILQNEEKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDVDRLIRLNLDSWTGRILLMEEAKKITFELAVKQLMSFDPCEWTQNLMNQYLLVIEGFFTVPLPLLSSTYRGAIQARKKVAEQLGAVVRRRRKESEGGARKKDMLGALLAGEDALSDEQIVDFLLALLVAGYETTSTTMTLAVKFLTETPLALAQLQEEHEQIKARRKESNQHLQWNDYKSMPFTQCVVNETLRIANIISGVFRRAMTDVNIKGYTIPKGWKVFASFRAVHLDHDHFKDARTFNPWRWQQNSSGSTTVNAFTPFGGGPRLCPGYELARVELSVFLHHLVTQFSWVPAEDDKLVFFPTTRTQKRYPIVVTRKNEARQCKDSHP 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 41160663 41169312 + Sed0013967.1 Sed07g2562 721426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2562 483 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g2562 483 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g2562 483 PRINTS P450 superfamily signature 281 298 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g2562 483 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g2562 483 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g2562 483 PRINTS E-class P450 group I signature 337 355 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g2562 483 PRINTS E-class P450 group I signature 290 316 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g2562 483 PRINTS E-class P450 group I signature 270 287 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g2562 483 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g2562 483 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g2562 483 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g2562 483 PANTHER CYTOCHROME P450 26 34 448 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
Sed07g2562 483 SUPERFAMILY Cytochrome P450 29 471 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g2562 483 Coils Coil 304 324 - -
Sed07g2562 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Sed07g2562 483 Gene3D Cytochrome P450 24 472 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g2562 483 FunFam Cytochrome P450 90A1 25 472 - -
Sed07g2562 483 Pfam Cytochrome P450 209 453 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed07g2562 483 CDD CYP90-like 67 471 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1700 Sed-Chr7:15411770 Sed07g2562 Sed-Chr7:41160663 1.60E-71 dispersed
Sed07g1701 Sed-Chr7:15411770 Sed07g2562 Sed-Chr7:41160663 1.60E-60 dispersed
Sed07g2562 Sed-Chr7:41160663 Sed09g1689 Sed-Chr9:40232290 6.80E-99 dispersed
Sed07g0150 Sed-Chr7:1343113 Sed07g2562 Sed-Chr7:41160663 1.40E-67 transposed
Sed09g0600 Sed-Chr9:6876910 Sed07g2562 Sed-Chr7:41160663 1.60E-79 transposed
Sed03g1311 Sed-Chr3:8403634 Sed07g2562 Sed-Chr7:41160663 3.50E-64 transposed
Sed04g2894 Sed-Chr4:40614330 Sed07g2562 Sed-Chr7:41160663 1.10E-237 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2562 K09588 - csv:101216594 833.172