Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed07g2613 | ATGGAGGTTCTAAGAAAAAGGGTCGCCGGTGGTGGGCTGCTTCAGGCGGCGGCGGCGGTGACGGCGGTGGTGCTGCTGCTGGCGGCGGTGCCGGATGTTTCGGCGACGAGGTGGACTGTCGGCGGCAACATGGGGTGGACGACCAATGTGAACTACACTATTTGGGCTGAAGGGAAGCATTTCTACTATGATGATTGGCTCTTTTTTGTGTATGACAGGAACCAAATGAACATATTGGAGGTGAACAAAACAGACTATGAAAGTTGCAATTCTGAACATCCACTCCACAATTACACCACAGGAGCTGGAAGAGATGTTGTTCATTTGAATGTCACCAGGCCCTATTACTTCATAAGTGGCAAGGGCTTTTGCTTCGGAGGCATGAAGCTCGCTATTCACGTCGAACACCTACCTCCCCCGCCCTCGAGCTCGCCCCTAAACGAGAAGAGCAGTTCTCCAAGATCTACCCACATTGGCCACACCCCATTCATTTTAGCTGCTGTTTTTGCAATTGCCGCCTTTCGGGAAGCTTTCGGTACGATCTGGTAG | 549 | 51.91 | MEVLRKRVAGGGLLQAAAAVTAVVLLLAAVPDVSATRWTVGGNMGWTTNVNYTIWAEGKHFYYDDWLFFVYDRNQMNILEVNKTDYESCNSEHPLHNYTTGAGRDVVHLNVTRPYYFISGKGFCFGGMKLAIHVEHLPPPPSSSPLNEKSSSPRSTHIGHTPFILAAVFAIAAFREAFGTIW | 182 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 41640490 | 41642666 | - | Sed0015366.1 | Sed07g2613 | 721477 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed07g2613 | 182 | Pfam | Plastocyanin-like domain | 46 | 128 | IPR003245 | GO:0009055(InterPro) | |
Sed07g2613 | 182 | ProSiteProfiles | Phytocyanin domain profile. | 36 | 136 | IPR003245 | GO:0009055(InterPro) | |
Sed07g2613 | 182 | PANTHER | BLUE COPPER PROTEIN | 24 | 140 | IPR039391 | GO:0009055(InterPro)|GO:0046658(PANTHER) | |
Sed07g2613 | 182 | SUPERFAMILY | Cupredoxins | 35 | 134 | IPR008972 | - | |
Sed07g2613 | 182 | Gene3D | - | 34 | 137 | IPR008972 | - | |
Sed07g2613 | 182 | FunFam | Lamin-like protein | 34 | 137 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed07g2613 | Sed-Chr7:41640490 | Sed12g1622 | Sed-Chr12:27231556 | 5.10E-15 | dispersed | |
Sed07g2613 | Sed-Chr7:41640490 | Sed08g1028 | Sed-Chr8:11547168 | 7.60E-27 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed07g2613 | - | - | - | 0.0 |