Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2613 ATGGAGGTTCTAAGAAAAAGGGTCGCCGGTGGTGGGCTGCTTCAGGCGGCGGCGGCGGTGACGGCGGTGGTGCTGCTGCTGGCGGCGGTGCCGGATGTTTCGGCGACGAGGTGGACTGTCGGCGGCAACATGGGGTGGACGACCAATGTGAACTACACTATTTGGGCTGAAGGGAAGCATTTCTACTATGATGATTGGCTCTTTTTTGTGTATGACAGGAACCAAATGAACATATTGGAGGTGAACAAAACAGACTATGAAAGTTGCAATTCTGAACATCCACTCCACAATTACACCACAGGAGCTGGAAGAGATGTTGTTCATTTGAATGTCACCAGGCCCTATTACTTCATAAGTGGCAAGGGCTTTTGCTTCGGAGGCATGAAGCTCGCTATTCACGTCGAACACCTACCTCCCCCGCCCTCGAGCTCGCCCCTAAACGAGAAGAGCAGTTCTCCAAGATCTACCCACATTGGCCACACCCCATTCATTTTAGCTGCTGTTTTTGCAATTGCCGCCTTTCGGGAAGCTTTCGGTACGATCTGGTAG 549 51.91 MEVLRKRVAGGGLLQAAAAVTAVVLLLAAVPDVSATRWTVGGNMGWTTNVNYTIWAEGKHFYYDDWLFFVYDRNQMNILEVNKTDYESCNSEHPLHNYTTGAGRDVVHLNVTRPYYFISGKGFCFGGMKLAIHVEHLPPPPSSSPLNEKSSSPRSTHIGHTPFILAAVFAIAAFREAFGTIW 182
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 41640490 41642666 - Sed0015366.1 Sed07g2613 721477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2613 182 Pfam Plastocyanin-like domain 46 128 IPR003245 GO:0009055(InterPro)
Sed07g2613 182 ProSiteProfiles Phytocyanin domain profile. 36 136 IPR003245 GO:0009055(InterPro)
Sed07g2613 182 PANTHER BLUE COPPER PROTEIN 24 140 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Sed07g2613 182 SUPERFAMILY Cupredoxins 35 134 IPR008972 -
Sed07g2613 182 Gene3D - 34 137 IPR008972 -
Sed07g2613 182 FunFam Lamin-like protein 34 137 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g2613 Sed-Chr7:41640490 Sed12g1622 Sed-Chr12:27231556 5.10E-15 dispersed
Sed07g2613 Sed-Chr7:41640490 Sed08g1028 Sed-Chr8:11547168 7.60E-27 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2613 - - - 0.0