Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2629 ATGATGTTATCCGAATCGCCTTCGATGTTAGCTCGGAGTTCACTCGAGGAAATGCTCGATTCACTTCGACGAAGGGATGAGGTTGATAAGCCTAAGGACTTGCCGCCTGCATTGCCGTCTCGGCCCGCTTCGAAGGCAAAACTGCCTCCGGTGGGTCGGGCGTTACCGGTCAATTTCAGGGTTAATGATGATGGCTCATCAGCGTGTTCTATTAATGGCTTTAATGGAAAGGAAGATGCAATGAGAAAGGAGACTGGTGTGGGGAACTTTGCAATCAAGAGAATGAATAGAGATCAAAATGAGGAATCGCCTTATGTGGTTGCTTCTAAAAATGATGATAAAGATCAAGTGAATGGCTCCAATGGTGATTTAATGTCAAATGTTCAAGGGTCTCACTTGCATGACAATATCAGTTATTTTCTTCTTAAGAAACTCCGTGTTTGGTGTCAACTTCCAAATGGACAATGGGAGTTAGGAACCATACAGTCAACCACTGGGGCAGAGGCATCAATCATGCTCTCAAACAAAAAGGTTATTAAAATTTCGACCGTAGATCTTTTACCTGCCAATCCAAATGTAGTGGAGGGGGTTGATGATCTTGTACAGCTTGGTTATTTGAACGAGCCTTCGGTTATTCACAGTCTCCAGCGAAGATTTTCCCGGGATAAGATTTATAGTAATGCAGGGTCAGTTTTGATTGCAGTCAATCCCCTGAAAGACACTAAACAGTATGGAAATGAATCTATTTCAGCATATAGACAGAGAGTCATAAACAGCCCTCATGTTTATGCAACAGCCGGTGCTGCTTATTCTGTGATGATGAAAGATGATGTTAATCAATCCATTATCATCAGTGGCGAAAGTGGAGCGGGAAAAACCGAGACAGCAAAAGTTGCCCTTCAGTACCTAACTGCTCTTGGTGGTGGTGGTGGCATAGATGATAGAATCCCACAGGCGAATATTATACTCGAAGCTTTTGGGAATGCTAAAACGTCCAGAAACAACAATGCCAGCAGATTTGGGAAGTTGATTGAAATTCTTTTTGGCAGAACAGGGAAGATATGTGGTGCTGTAATCCAAACTTTTCTGTTGGAAAAGTCAAGAGTTGTTCAGCTGTTCAGTGGTGAAAGATCATTCCACGTCTTCTATCAACTTTGTGCTGGAGCGCCTTCAACACTCAAAGAGAAGTTGAATATCAGAGCGGCCAGTGAGTACAGTTACCTTAATAACAGTGAATGCCTGGCGATTAGTGGTGTGGATGATGCACAGAAATTTCGTATTCTTGTGGAAGCCCTAGATAAACTTAAATTCAGTAGGGAAGATCAAGAGCATGCATTTGGTTTGCTTTCTGCAGTTTTATGGATAGGGAACATTACGTTTCAAACAATTGATAGCGGAAATCATGTGGAGGTCATAGCTAATGAAGCGGTTGCAAATGCTTCCAAGCTGATGGGCTGCAGTTTTAATGAGCTTAAGTTAGTTTTATCAAGCCACAAAGAGCAATCTGGCAAGGATAGTGCTGCTAAAAAAATGACATTACGACAGGCAACCGATGCAAGAGATGCATTGGCAAAATTTATCTATGCAAGCTTGTTTGATTGGCTTGTAGAGCAGATCAATAAGACACTTAAACCAGGAAGAGAGCATTCTGGAAGATCCATAAATATCGTCGACTTCTATGGGTTTGAGTCATTTAAGAAGAATGGCTTCGAACAATTTTGTATCAATTATGCAAATGAGAGACTGCAGCAGCATTTTGTGCGGCATCTGTTCAAACTTCAACGGGAGGACTACGAATATAACGGGGTTGATGGCACGACAGTCAACTTTGAAGACAATCAAGAGTGTTTGAATCTCATCGAGAAGAAACCTCTAGGAGTTCTAGCTGTGTTGGACGAGGAGTTAAGTTTTCCCAAGGCTACAGATCTGACATTTGCCAATAAACTTAAGCAACACTTTAAATCTAATCCTTCCTTTAAAGGGGAAAGAGGTAGGGCTTTTGGTGTTCGCCATTATGCTGGAGAGGTTGTCTACGATACAAATGGATTTTTGGAGAAGAATAGAGATCAGTTGCATTCAGATTCCATCCAACTCTTTTCATCATGTACTTGCAAGCTACTGCAATTATTTTCCTTCAAACTGTTTAACCCTTCCCACAAACCAACAGTTTCAAAGTGCTCTACAGAAGTAGTAGAATCCCCTGAGCCAGGTGTTGGTACCAAGTACAAGGTTCTACTGTTTGACCTATTCCATAAATTGGAGCGCACCGGCCATCACTTCATTTGTTGCATGAGACCGAACAGAAACCAAGTTTGTGGCTTATTTGAGGAGGACCTTGTTTTACAACAGCTTAGAAACTATGGAATTTTGGAGGTGGTTAGGATTTCAAAATATGGATTTCCTTCCAGAATGACACATCATGAATTTGCTGGAAGGTACGGATTCTTCCTTGGCAAAACTGGTGTATCTCAAGATCCATTGAGCATATCGATGGCTGTTCTGCAACAATTTAATGTTCATCCCGAGTTATACCATGTTGGTTATACTAAACTCTTTTTCCGAACTGGGCAGATGAGGGCATTGGAGGAAAGGAGGATGGAGGTGTTGCAAGGCATCCTAGGGCTTCAAAAGTACTTCCGTGGTTGCCATTCCCGTGGCCACTTCCATGAACATAAGCAAGCCGCCACTACCTTACAATCATTTATTCGTGGTGAAAATGCCAGACGGACATGTACCGGTAAGGTGAAGAGGTTTTCATTCGTCGTGTATGCTATCAGTGTTCCTACGAAGGTTTATGAACTGCAGGCAATCATACGATTGCAATCTGTAATACGTGGTTCATTGGCTCGAAAGCATTTTAAGGGCACAAATTATTCGAAAAAGGTTTTCCTTGAAAACAGAAAATCTAAACCGAACACAGGCAGGAGACTTTCAGAGGATAAATTTCAAGAACGGGGTCTAGCCCTGACTGACCTTCAAAAGCGAGTCTTCGAGGCAGAAGCGACCATAGGGAAAAAGGAAGAGGAAAATGCTGCACTGCGGGACCAAGTAAAACAATTCGAGGCCCGGCGGTTAGAATACGAAGCCAAGATGAAGTCCATGGAAGATATGTGGCAAAAGCAGATGGCATCTTTGCAAATGAGTCTTGCTGCTGCTAAAAAGACTCTTGCTACTGAAAATGTAGCATGTGCACCTGCAAAAGTTGATGCTGGTAACTTGCCACCTCACAATAATAATTCTGAGGATAAGACATCCATGGAATCTCAAACTCCTGAAGTTGGCGCTGGGCGAAAACTGAACAGTACTTTAGCTGCAGTGAACAATCTCGTAAAGGACTTCGAACAGCGAAAGAATGCATTTGATGATGATGCAAAAGCTTTAACTGAAGCAAAATCAGATCAGGCACAGAACGTGAATCCTAACGAAGAATACCGAAAAATTAAAATCCGGTTTGAAGCATGGAAAAAGGAGTACAAGGCAAGATTAAGGGAAACTAAACCCAAGGGTCGTAAACATGGACATTTTGATGTTGATAAGATTGGTAGAAAATGGTGGGGGAAGTTTAGCTCAAAAGCATCATAG 3582 42.16 MMLSESPSMLARSSLEEMLDSLRRRDEVDKPKDLPPALPSRPASKAKLPPVGRALPVNFRVNDDGSSACSINGFNGKEDAMRKETGVGNFAIKRMNRDQNEESPYVVASKNDDKDQVNGSNGDLMSNVQGSHLHDNISYFLLKKLRVWCQLPNGQWELGTIQSTTGAEASIMLSNKKVIKISTVDLLPANPNVVEGVDDLVQLGYLNEPSVIHSLQRRFSRDKIYSNAGSVLIAVNPLKDTKQYGNESISAYRQRVINSPHVYATAGAAYSVMMKDDVNQSIIISGESGAGKTETAKVALQYLTALGGGGGIDDRIPQANIILEAFGNAKTSRNNNASRFGKLIEILFGRTGKICGAVIQTFLLEKSRVVQLFSGERSFHVFYQLCAGAPSTLKEKLNIRAASEYSYLNNSECLAISGVDDAQKFRILVEALDKLKFSREDQEHAFGLLSAVLWIGNITFQTIDSGNHVEVIANEAVANASKLMGCSFNELKLVLSSHKEQSGKDSAAKKMTLRQATDARDALAKFIYASLFDWLVEQINKTLKPGREHSGRSINIVDFYGFESFKKNGFEQFCINYANERLQQHFVRHLFKLQREDYEYNGVDGTTVNFEDNQECLNLIEKKPLGVLAVLDEELSFPKATDLTFANKLKQHFKSNPSFKGERGRAFGVRHYAGEVVYDTNGFLEKNRDQLHSDSIQLFSSCTCKLLQLFSFKLFNPSHKPTVSKCSTEVVESPEPGVGTKYKVLLFDLFHKLERTGHHFICCMRPNRNQVCGLFEEDLVLQQLRNYGILEVVRISKYGFPSRMTHHEFAGRYGFFLGKTGVSQDPLSISMAVLQQFNVHPELYHVGYTKLFFRTGQMRALEERRMEVLQGILGLQKYFRGCHSRGHFHEHKQAATTLQSFIRGENARRTCTGKVKRFSFVVYAISVPTKVYELQAIIRLQSVIRGSLARKHFKGTNYSKKVFLENRKSKPNTGRRLSEDKFQERGLALTDLQKRVFEAEATIGKKEEENAALRDQVKQFEARRLEYEAKMKSMEDMWQKQMASLQMSLAAAKKTLATENVACAPAKVDAGNLPPHNNNSEDKTSMESQTPEVGAGRKLNSTLAAVNNLVKDFEQRKNAFDDDAKALTEAKSDQAQNVNPNEEYRKIKIRFEAWKKEYKARLRETKPKGRKHGHFDVDKIGRKWWGKFSSKAS 1193
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 41760282 41769796 + Sed0008404.1 Sed07g2629 721493
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2629 1193 ProSiteProfiles Myosin motor domain profile. 195 866 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Sed07g2629 1193 Gene3D Myosin VI head, motor domain, U50 subdomain 434 542 - -
Sed07g2629 1193 Gene3D - 800 867 - -
Sed07g2629 1193 SMART MYSc_2a 189 867 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Sed07g2629 1193 ProSiteProfiles IQ motif profile. 933 961 - -
Sed07g2629 1193 Coils Coil 1110 1130 - -
Sed07g2629 1193 PRINTS Myosin heavy chain signature 279 304 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Sed07g2629 1193 PRINTS Myosin heavy chain signature 321 348 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Sed07g2629 1193 PRINTS Myosin heavy chain signature 225 244 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Sed07g2629 1193 PRINTS Myosin heavy chain signature 553 581 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Sed07g2629 1193 PRINTS Myosin heavy chain signature 606 634 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Sed07g2629 1193 MobiDBLite consensus disorder prediction 1 50 - -
Sed07g2629 1193 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 912 IPR027417 -
Sed07g2629 1193 Pfam Myosin head (motor domain) 197 854 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Sed07g2629 1193 SMART iq_5 890 912 IPR000048 GO:0005515(InterPro)
Sed07g2629 1193 SMART iq_5 932 954 IPR000048 GO:0005515(InterPro)
Sed07g2629 1193 SMART iq_5 867 889 IPR000048 GO:0005515(InterPro)
Sed07g2629 1193 ProSiteProfiles IQ motif profile. 891 919 - -
Sed07g2629 1193 CDD MYSc_Myo8 209 854 IPR036022 -
Sed07g2629 1193 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 142 191 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Sed07g2629 1193 Gene3D - 872 917 - -
Sed07g2629 1193 MobiDBLite consensus disorder prediction 1073 1094 - -
Sed07g2629 1193 Gene3D - 565 756 - -
Sed07g2629 1193 Pfam IQ calmodulin-binding motif 893 910 IPR000048 GO:0005515(InterPro)
Sed07g2629 1193 Pfam IQ calmodulin-binding motif 935 954 IPR000048 GO:0005515(InterPro)
Sed07g2629 1193 FunFam Myosin heavy chain 377 433 - -
Sed07g2629 1193 Gene3D Kinesin motor domain 194 799 IPR036961 -
Sed07g2629 1193 Gene3D - 377 433 - -
Sed07g2629 1193 MobiDBLite consensus disorder prediction 1067 1094 - -
Sed07g2629 1193 PANTHER MYOSIN 146 1167 - GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER)
Sed07g2629 1193 Coils Coil 989 1037 - -
Sed07g2629 1193 MobiDBLite consensus disorder prediction 17 34 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g2384 Sed-Chr7:39651943 Sed07g2629 Sed-Chr7:41760282 1.90E-291 dispersed
Sed07g2385 Sed-Chr7:39651943 Sed07g2629 Sed-Chr7:41760282 1.90E-291 dispersed
Sed07g2629 Sed-Chr7:41760282 Sed08g0895 Sed-Chr8:7500253 2.90E-143 dispersed
Sed04g3144 Sed-Chr4:42237027 Sed07g2629 Sed-Chr7:41760282 0.00E+00 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2629 K10357 - csv:101210624 1911.35