Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2664 ATGATTTGTGCTGTGAATCAGTCTTCTAGGGCTATTAATTGCTCTAATGGGGTTTCTCGGAGCAAAATCTCCGTTCCCTTTCAGCGATCTTCGTTTCTTCCTCCTCTTCCGGTTCAAAAACCTAGAAAAAATTCTTGTGTTTCTGTTCATAAGGCTTTACATGTTTCTTCGCTTGTGAATTTTGGATCATTTGGGGTTCGTAAAGTGGATTCGATCAAATGCGAAGCTTATGAGGCTGAGCGATCGCAGCCGATCGAATCGAGCATTGAGTTGCCGCAAACTCAGACCCCTTCTGAGGCTGCCAAGAAGTTGAAGATTGGATTGTACTTTGCTCTTTGGTGGGCTTTGAATGTGGTTTTCAATATCTATAACAAGAAGGTTTTGAATGCGTATCCATTTCCATGGCTCACTTCGACTCTGTCGCTTGCGGCGGGATCTGTGATCATGTTGATCTCGTGGATGACGAGAATTGCTGAGGCGCCGAAAACGGATTTCGAGTTTTGGAAGTCTTTGCTCCCTGTTGCTGTTGCCCATACAATTGGACATGTTGCTGCAACCGTGAGTATGTCAAAGGTTGCAGTTTCATTCACTCACATTATCAAGAGTGGTGAACCTGCTTTTAGCGTATTGGTTTCAAGGTTGTTGTTGGGCGAGACCTTCCCGCTTACTGTCTACTTGTCGCTCATCCCAATCATCGGTGGATGTGGTCTTGCTGCCGTGACCGAGCTCAACTTTAACATGACGGGTTTTATGGGTGCCATGATATCAAACTTGGCATTTGTATTCCGTAACATATTTTCAAAGAAGGGCATGAAGGGAAAATCTGTTAGCGGGATGAACTACTATGCGTGTTTATCGATTTTATCTTTGTTAATCCTGACGCCATTTGCAATTGCTGTGGAGGGACCACAGTTATGGGCTTCTGGATGGCAAACAGCCATATCTCAAATTGGACCTAATTTTATTTGGTGGGTAGCAGCACAAAGTATATTCTACCATCTCTATAACCAGGTCTCTTACATGTCCTTGGATGAGATTTCTCCCTTGACGTTTAGCGTTGGAAACACCATGAAACGTATTTCGGTCATAGTTTCTTCCATCATCATCTTCCGCACGCCCGTGCAGCCAATCAATGCCCTCGGAGCTGCCATTGCAGTTCTTGGAACCTTTATATACTCGCAGGCAAAGCAATGA 1194 44.47 MICAVNQSSRAINCSNGVSRSKISVPFQRSSFLPPLPVQKPRKNSCVSVHKALHVSSLVNFGSFGVRKVDSIKCEAYEAERSQPIESSIELPQTQTPSEAAKKLKIGLYFALWWALNVVFNIYNKKVLNAYPFPWLTSTLSLAAGSVIMLISWMTRIAEAPKTDFEFWKSLLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRLLLGETFPLTVYLSLIPIIGGCGLAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWASGWQTAISQIGPNFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSVGNTMKRISVIVSSIIIFRTPVQPINALGAAIAVLGTFIYSQAKQ 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 42095070 42099350 + Sed0023072.1 Sed07g2664 721528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2664 397 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 104 396 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Sed07g2664 397 Pfam Triose-phosphate Transporter family 104 393 IPR004853 -
Sed07g2664 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 147 239 - -
Sed07g2664 397 PANTHER SOLUTE CARRIER FAMILY 35 100 396 IPR050186 GO:0005794(PANTHER)|GO:0015120(PANTHER)|GO:0015297(PANTHER)|GO:0071917(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g2664 Sed-Chr7:42095070 Sed10g0619 Sed-Chr10:4127415 4.80E-151 dispersed
Sed10g0285 Sed-Chr10:1688906 Sed07g2664 Sed-Chr7:42095070 1.60E-61 transposed
Sed12g0279 Sed-Chr12:1599613 Sed07g2664 Sed-Chr7:42095070 1.60E-88 transposed
Sed04g3192 Sed-Chr4:42612918 Sed07g2664 Sed-Chr7:42095070 4.20E-203 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2664 K15283 - csv:101220046 698.738