Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed07g2681 | ATGGTTGAATCAGACTTCCAGATCCCATCCGCTTTCGATCCATTCGCCGACGCAAAGGATTCGGATGCCCCCGGGGCAAAAGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGTAAGAAGTGCTTGACGACAGTGCAAGGTCTGAAGAAGAACTTGAGCTACGAAAAGATTCTGAAAGACGTGAAGAAGGAATTCTGCTGTAATGGTAACGTGGTTCAAGACAAAGAATTGGGGAAGATAATTCAGCTTCAAGGCGACCAGCGCAAAAACGTCTCTCAATTCCTGGTTCATGCTGGAGTTGCCAAGAAGGATCAAATCAAAATCCATGGATTTTAA | 339 | 45.72 | MVESDFQIPSAFDPFADAKDSDAPGAKEYVHIRVQQRNGKKCLTTVQGLKKNLSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGVAKKDQIKIHGF | 112 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 42206324 | 42208374 | + | Sed0016288.1 | Sed07g2681 | 721545 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed07g2681 | 112 | PIRSF | Transl_init_SUI1_Euk | 1 | 112 | IPR005874 | GO:0003743(InterPro) | |
Sed07g2681 | 112 | NCBIfam | translation initiation factor SUI1 | 7 | 112 | IPR005874 | GO:0003743(InterPro) | |
Sed07g2681 | 112 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Sed07g2681 | 112 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 3 | 112 | - | GO:0003723(PANTHER) | |
Sed07g2681 | 112 | CDD | eIF1_SUI1 | 28 | 111 | IPR005874 | GO:0003743(InterPro) | |
Sed07g2681 | 112 | FunFam | Eukaryotic translation initiation factor SUI1 | 2 | 112 | - | - | |
Sed07g2681 | 112 | Pfam | Translation initiation factor SUI1 | 27 | 101 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Sed07g2681 | 112 | Gene3D | - | 1 | 112 | - | - | |
Sed07g2681 | 112 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 30 | 100 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Sed07g2681 | 112 | SUPERFAMILY | eIF1-like | 4 | 112 | IPR036877 | GO:0003743(InterPro)|GO:0006413(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed05g2008 | Sed-Chr5:33341144 | Sed07g2681 | Sed-Chr7:42206324 | 8.10E-43 | dispersed | |
Sed07g2681 | Sed-Chr7:42206324 | Sed04g3290 | Sed-Chr4:43283102 | 1.80E-42 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed07g2681 | K03113 | - | csv:101202908 | 215.698 |