Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2718 ATGGTGGAGAAAGAGAATCAATGTGTTGTTGTTGCAGAGCCTCGTCTTGTGGCTAGAAAGTTTCTGGCTAGGCCTCAACATGAGGGGTTGGGTGCCATTGTTAGAAGAAGCATTGGAAGGTTTGAGCTGAAATACTTTGACCCTTTTCTGGTTTTGGATGAATTTTCAGTTACTGCTCCTGCTGGGTTCCCTGATCATCCACATAGAGGATTTGAGACAGTGACCTACATGTTACAGGGAAGTGTGACACATGAAGATTTTGAAGGCCACAAGGGAACAATTAGTGCAGGTGACTTGCAGTGGATGACTGCAGGTAGAGGAATTTTACATTCAGAAATGCCTGCAGCCCATGGAACCCAAAAGGGCCTACAACTATGGATCAACCTCTCTTCCAAGAATAAAATGATTGAGCCAAATTACCAAGAAGTTTTAACCAAGGAAATACCAGAAGCTACAAAAGATGGAGTGAGAGTAAAAGTCATAGCTGGTGAGGCATTGGGAGCAAAATCACCAATCTACACAAGAACTCCAACCATGTACTTAGATTTCACTCTCAAGCCGAAAGCTCATCTCCGCCAGCCGATCCCATCATCCTGGAATGCGTTCGTTTACATTCTAGAAGGTGAAGGCATCTTCGGCAGCTCAAAGGCGACGTCGACGACAGCGCATAACCTTCTTCTGCTCGGGTTGGGGGATGGTTTAGAGGTTTGGAATAAGTCAGCCAAGCCTCTAAGGTTCATTTTGGTAGGAGGTGAACCATTGAATGAACCTGTTGTGCAATTTGGGCCATTTGTGATGAACACTCAAGAAGAAATTGACCAAACAATTGATGATTTTGATAACTATACTAATGGGTTTGAGAAAGCAAGGCATTGGAGATCAGAAGCTGCAATTTCAATTGGATTCTAA 909 43.78 MVEKENQCVVVAEPRLVARKFLARPQHEGLGAIVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGSVTHEDFEGHKGTISAGDLQWMTAGRGILHSEMPAAHGTQKGLQLWINLSSKNKMIEPNYQEVLTKEIPEATKDGVRVKVIAGEALGAKSPIYTRTPTMYLDFTLKPKAHLRQPIPSSWNAFVYILEGEGIFGSSKATSTTAHNLLLLGLGDGLEVWNKSAKPLRFILVGGEPLNEPVVQFGPFVMNTQEEIDQTIDDFDNYTNGFEKARHWRSEAAISIGF 302
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 42384795 42389205 + Sed0019587.1 Sed07g2718 721582
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2718 302 CDD cupin_pirin_C 177 253 - -
Sed07g2718 302 Gene3D Jelly Rolls 149 254 IPR014710 -
Sed07g2718 302 FunFam pirin 28 165 - -
Sed07g2718 302 Gene3D Jelly Rolls 28 280 IPR014710 -
Sed07g2718 302 CDD cupin_pirin_N 34 129 - -
Sed07g2718 302 SUPERFAMILY RmlC-like cupins 15 294 IPR011051 -
Sed07g2718 302 PANTHER PIRIN-RELATED 7 295 IPR012093 -
Sed07g2718 302 PIRSF Pirin 13 293 IPR012093 -
Sed07g2718 302 Pfam Pirin C-terminal cupin domain 180 284 IPR008778 -
Sed07g2718 302 Pfam Pirin 34 127 IPR003829 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g1057 Sed-Chr2:47931084 Sed07g2718 Sed-Chr7:42384795 1.20E-119 dispersed
Sed07g2718 Sed-Chr7:42384795 Sed12g0676 Sed-Chr12:4047754 9.80E-120 dispersed
Sed07g2718 Sed-Chr7:42384795 Sed07g2719 Sed-Chr7:42384795 1.10E-131 tandem
Sed04g3683 Sed-Chr4:45797514 Sed07g2718 Sed-Chr7:42384795 5.50E-163 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2718 K06911 - csv:101216351 555.058