Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2719 ATGTTACAGGGAAGTGTGACACATGAAGATTTTGAAGGCCACAAGGGAACAATTAGTGCAGGTGACTTGCAGTGGATGACTGCAGGTAGAGGAATTTTACATTCAGAAATGCCTGCAGCCCATGGAACCCAAAAGGGCCTACAACTATGGATCAACCTCTCTTCCAAGAATAAAATGATTGAGCCAAATTACCAAGAAGTTTTAACCAAGGAAATACCAGAAGCTACAAAAGATGGAGTGAGAGTAAAAGTCATAGCTGGTGAGGCATTGGGAGCAAAATCACCAATCTACACAAGAACTCCAACCATGTACTTAGATTTCACTCTCAAGCCGAAAGCTCATCTCCGCCAGCCGATCCCATCATCCTGGAATGCGTTCGTTTACATTCTAGAAGGTGAAGGCATCTTCGGCAGCTCAAAGGCGACGTCGACGACAGCGCATAACCTTCTTCTGCTCGGGTTGGGGGATGGTTTAGAGGTTTGGAATAAGTCAGCCAAGCCTCTAAGGTTCATTTTGGTAGGAGGTGAACCATTGAATGAACCTGTTGTGCAATTTGGGCCATTTGTGATGAACACTCAAGAAGAAATTGACCAAACAATTGATGATTTTGATAACTATACTAATGGGTTTGAGAAAGCAAGGCATTGGAGATCAGAAGCTGCAATTTCAATTGGATTCTAA 681 43.32 MLQGSVTHEDFEGHKGTISAGDLQWMTAGRGILHSEMPAAHGTQKGLQLWINLSSKNKMIEPNYQEVLTKEIPEATKDGVRVKVIAGEALGAKSPIYTRTPTMYLDFTLKPKAHLRQPIPSSWNAFVYILEGEGIFGSSKATSTTAHNLLLLGLGDGLEVWNKSAKPLRFILVGGEPLNEPVVQFGPFVMNTQEEIDQTIDDFDNYTNGFEKARHWRSEAAISIGF 226
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 42384795 42389205 + Sed0019587.2 Sed07g2719 721583
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2719 226 PANTHER PIRIN-RELATED 1 219 IPR012093 -
Sed07g2719 226 CDD cupin_pirin_C 101 177 - -
Sed07g2719 226 Pfam Pirin 1 51 IPR003829 -
Sed07g2719 226 Pfam Pirin C-terminal cupin domain 104 208 IPR008778 -
Sed07g2719 226 Gene3D Jelly Rolls 1 204 IPR014710 -
Sed07g2719 226 SUPERFAMILY RmlC-like cupins 1 218 IPR011051 -
Sed07g2719 226 PIRSF Pirin 1 217 IPR012093 -
Sed07g2719 226 Gene3D Jelly Rolls 73 178 IPR014710 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g3683 Sed-Chr4:45797514 Sed07g2719 Sed-Chr7:42384795 1.20E-122 dispersed
Sed07g2719 Sed-Chr7:42384795 Sed12g0676 Sed-Chr12:4047754 7.10E-91 dispersed
Sed07g2718 Sed-Chr7:42384795 Sed07g2719 Sed-Chr7:42384795 1.10E-131 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2719 K06911 - csv:101216351 423.32