Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2806 ATGGCCGCCACCGTCAACTTACCGCGAAATCAGTTATCCGCGCTGGTCATTTTCTCACTCTTGGCCGCCGTCGTCGTCGTCGTCGCCGGAGAAACCTCCTTCTTCAACCACCGCAAGATCTCCGCCGTCGTCAGAACTTCTCCTTCCGTTTCCAACTCCACCTACGCCGTCGTTTTCGACGCCGGAAGCTCCGGCAGCCGCGTCCACGTCTTCCACTTCGATCGAAACCTCGATCTCCTCTTCATCGGTTCCGACATTGAGGTTTTCTCACAGATCAAGCCAGGCCTCAGTTCCTACTCCGATGATCCTCAAAAAGCCGCAGATTCTCTAATTCCTCTACTCGAAAAAGCAGAAGCCGCGGTTCCTGAAAACCTCCGATCCGCGACTCCGATTCGCCTCGGAGCGACTGCGGGGCTTAGGTTCTTGGAAGGCGACAGATCTGAGAGGATTTTGGAAGCGGTTAGGGTTCTTCTGGAAACGAAAGGCGGATTCAAATACGAAGCGGATTCGGTTTCGATTCTTGATGGAAATCAAGAAGGTTCATATCAATGGTTGACAGTAAACTATTTGCTTGAGAATTTGGGGAAGAGATATTCAAATACAGTGGGAGTAATTGATCTTGGTGGTGGCTCTGTTCAAATGGCATATGCAATTTCTGATGAAGATGCAGCAAAGGCGCCCATTTCTACCGATGGAAATTCCAAATTTGTCCAAAATTTTAATCTCAAGGGTGCAAATTATAACCTCTACGTTCACAGTTATTTGCGTTACGGTTTACAAGCTGCACGAGTAGAGATTTTGAAGGTTACCAAAGAACTTGGCAACCCCTGCATTTTAGCCGGTTACAAAGGTACGTACACATACGGTGGAGAGGAATACAAAGTATCAGCTTCTAGATCAGGGTCAAGCTTTGCTCGTTGCCGAAGTGTAATTTTGGAAGCTCTTAAACTCAACAAATCTTGTGGCTACAAGGAATGCTCGTTTGATGGCATATGGAGTGGCGGCGGAGGAGCCGGTTTCGATAATCTTTATGTTGCTTCCTTTTTCTTTGACAAGGCAGCTCAGGCGGGCTTCATTGATTCCGAAAAACCAGACGTTATAGTGAAACCTTTTGATTTCAAGAAAGCAGCAAGGATTGCTTGTCAAACTAAGTTTGTTGATGCAAAGTCCAAATACCCTAATGTCTACTCAAGTGACTTGCAATTTGTCTGCTTGGATCTCGTTTACGAGTACGCACTTCTCGTCGATGGATTCGGTATTGATTCAAGAAAGAAGATAACATTAGTGAAGCAAGTGGCTTATCATGGTTCCCTTGCAGAGGCAGCATGGCCATTGGGCAATGCTGTTGCAGTTGTCTCATCACCAAACTACTCAACTGCTAAGTATTGA 1389 46.51 MAATVNLPRNQLSALVIFSLLAAVVVVVAGETSFFNHRKISAVVRTSPSVSNSTYAVVFDAGSSGSRVHVFHFDRNLDLLFIGSDIEVFSQIKPGLSSYSDDPQKAADSLIPLLEKAEAAVPENLRSATPIRLGATAGLRFLEGDRSERILEAVRVLLETKGGFKYEADSVSILDGNQEGSYQWLTVNYLLENLGKRYSNTVGVIDLGGGSVQMAYAISDEDAAKAPISTDGNSKFVQNFNLKGANYNLYVHSYLRYGLQAARVEILKVTKELGNPCILAGYKGTYTYGGEEYKVSASRSGSSFARCRSVILEALKLNKSCGYKECSFDGIWSGGGGAGFDNLYVASFFFDKAAQAGFIDSEKPDVIVKPFDFKKAARIACQTKFVDAKSKYPNVYSSDLQFVCLDLVYEYALLVDGFGIDSRKKITLVKQVAYHGSLAEAAWPLGNAVAVVSSPNYSTAKY 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 42918079 42927692 - Sed0005957.1 Sed07g2806 721670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2806 462 FunFam Apyrase 1 175 433 - -
Sed07g2806 462 Pfam GDA1/CD39 (nucleoside phosphatase) family 51 455 IPR000407 GO:0016787(InterPro)
Sed07g2806 462 CDD NBD_sugar-kinase_HSP70_actin 57 216 - -
Sed07g2806 462 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 174 189 IPR000407 GO:0016787(InterPro)
Sed07g2806 462 Gene3D Exopolyphosphatase. Domain 2 175 433 - -
Sed07g2806 462 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 15 452 IPR000407 GO:0016787(InterPro)
Sed07g2806 462 Gene3D - 55 448 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g2806 Sed-Chr7:42918079 Sed14g0693 Sed-Chr14:6890917 1.20E-140 dispersed
Sed07g2806 Sed-Chr7:42918079 Sed03g2398 Sed-Chr3:20444103 6.00E-145 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2806 K14641 - mdm:103428652 512.301