Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2863 ATGTCGAATACACTAAACCAGATTCCAATGGCCACCAAGATCCCAGCTCTCCTTCCCCATGACCTAAACCATGTAGTAGTGGTTGATGAAATCCAATCCCAGCCCTTCGACTACTCCAAACGCGCCCAATGGCTACGCGCTGCCGTCCTCGGTGCCAACGATGGCCTCGTCTCCACAGCCTCTCTCATGATGGGCATCGGCGCTGTCAAGCACGACGTCAAGGCCATGATCCTCACTGGCTTTGCCGGCCTTGTCGCCGGTGCTTGCAGCATGGCCATCGGCGAGTTCGTCTCCGTCTACTCCCAGTTGGATATCGAAATGGCCCAGATCAAAAGAAACAAGGAGGAAGAGGAGGAGAAGAGCGAGAGGCTGCCCAACCCTCTTCAGGCTGCGGTAGCTTCCGCGTTGGCATTTTCGGTGGGGGCAATCGTGCCGCTGCTGGCGGCTGCGTTCGTGAAGGAGTATTGGGTTCGGCTCGGGGTGGTGGTGAGTGCGGTGACGGTGGCGCTTATGGGGTTCGGGTGGTTGGGAGCTGCGCTCGGGAAGGCACCCATGGTGAGGTCGGCAGTGAGGGTTTTGATCGGAGGGTGGGTGGCCATGGCTGTGACTTTTGGATTGACTAAGTTGATTGGGTCCAGTGGACTGTGA 648 58.02 MSNTLNQIPMATKIPALLPHDLNHVVVVDEIQSQPFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKHDVKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEMAQIKRNKEEEEEKSERLPNPLQAAVASALAFSVGAIVPLLAAAFVKEYWVRLGVVVSAVTVALMGFGWLGAALGKAPMVRSAVRVLIGGWVAMAVTFGLTKLIGSSGL 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 43367755 43368606 + Sed0011394.1 Sed07g2863 721727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2863 215 Coils Coil 100 120 - -
Sed07g2863 215 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 30 212 IPR008217 GO:0005381(PANTHER)|GO:0005384(PANTHER)|GO:0005384(InterPro)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(PANTHER)|GO:0030026(InterPro)
Sed07g2863 215 Pfam VIT family 45 122 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Sed07g2863 215 Pfam VIT family 121 207 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g0346 Sed-Chr6:3124787 Sed07g2863 Sed-Chr7:43367755 4.50E-60 dispersed
Sed07g2863 Sed-Chr7:43367755 Sed11g1346 Sed-Chr11:29523951 3.00E-70 dispersed
Sed07g2863 Sed-Chr7:43367755 Sed03g0480 Sed-Chr3:2927380 7.80E-71 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2863 K22736 - csv:101210510 328.561