Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed07g2872 | ATGGTGCCTTCGGGGCCATCTACACCCATTGGTGGGCCACAGTCTGTTTCACCATCACTTTTGAGATCAAATTCTGGAATGATGGGAGCACATGGGGTTCCTTCTCAGTCAGCTTTTCCTTCTCTTGTATCTCCACAAACTCAGTTCAGTAGTATGAATATGCTTGGTAATCAGCCATTCGGGAATGGAGTTCCGAATTATGGGCCCTCAGGTCTCGGAAACAGCCATCGAGCAGGTATGGATTCTGATTCTGGGTCAGATCCATTTTCACTTGTTGGCAATGGTGTGAACTTCAACAATACCCCATCGTCATTAGTGGTATTAAATACAGCAAACGTTGGTTCATCTAGTCAAGTTTCAGGGCCACAATTTTCAAACCATTCTAGCAGCCAAATGATACCCAATCAACAGCAAATTGAACCCCAGAATTTCCAACATAGTCAGCATTCAATGCAACAATTCACTACCTCTAATGATGCACAACAGTCGCAGCAGCAACATCAATTCCAACCTATTCGAGGAAGCTCATGTGGTGTTGGACCTGTCAAGTTAGAGCCTCAAATGAATAATAATGATCTTCAAGGGCAGCAGCTACAGAACCAGGAGTTGCAATCAATGATGAATCTTGGTTCTTCACCGGAACCGCAACAATTTCAATCGATGAGAAACTTGGGTCCTGCCCAATTGGAGTCTCAACAGTCTGATCCATCATTGTTTCGACAGCAGCAACATCAACAACAACAGCAACAACAACAGTTACTCGGCATGTCTAGGCAGGCCTCTCAGGCTGCTGCTGCTGCGCAGATTAATCTTTTGCAACAACAAAGATTCTTGCAATTTCAACATCAACAGCAACTCCTGAAAGCTATTCATCAGCAACGACCACATTTTCCTCAACAATTTCAACAGCAAAATTTTCCATTGAGATCTCCCGTAAAACCAGTTTATGAACCTGGCATGTGTGCTCGACGTTTAACAAATTATGTCTGCCGACAACAGCAAAGGCCTGGAGATAACAATATTGAGTTCTGGAGAGATTTTGTTTCGGATTACTTTGCTCCCCATGCCAAAAAGAAATGGTGTGTCTCCATGTATGGAAATAGTCGCCAAACAACTGGTGTATTTCCACAGGATGTTTGGCGTTGTGAAATATGCAACCGCAAGCCTAGTCGAGGTTTTGAAGCAACTTTTGAAGTTCTTCCTAGGCTGTTTAAACTAAAGTATGAAAGCGGAACTCTTGAAGAGCTTCTCTATGTTGATATGCCCTACGAATATCATAATTCATCTGGACAAATCGTCCTGGATTATGCAAAAGCAATACAAGTAAGCGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGCAAACTTCGGATAGTTTTTTCTCCAGACGTAAAGATATGTTCTTGGGAATTTTGTGCTCGACGTCATGAAGAGCTTATTCCTCGAAGGTTACTAATGCCTCAGGTTAGTCAGCTGGGGGCAGCTGCTCAGATGTATCAGACTGCTATTCAAAATGCATCACCTAACTTGTCTACTCCGGAGTTGCAAAATAATTGCAACATGTTTGTGGGCTCAGCCAGACAATTAGCAAAGGCATTGGAAGTGCCATTAGTAAACGACTTTGGATATACTAAGAGATATGTCCGGTGCCTTCAGATATCAGAAGTCATCAATAGTATGAAGGACTTGATAGATTACAGCCAAGAAACTTCGACTGGACCAATCGAGAGTTTGGCCAAGTTTCCACGGAAGACAAATGCTTCACCAGGATTCCACAGCCAAGCTCAAAACACCGTGCAACAATTATCTCAGCCCCAGAAAATTATTGATCAAAATGCGAACGGTGACCATTCTGTTCAGGCTGCTGCTAACAATGGTGTTCCAAATGCAAATAACAATGCTAATCAAGCTTCAACATCAGCTCCTGTTGGGTTACACCACCAGAATTCCATGAACTCCAGACACCAGAACTCTATCAATAGTGGTGGCAGCCCTTACGGCAGGGATTCTGCCCAAACATCATCTCCAGGCCCCTCGACGACGGTTGCTCAGAAACAAGCGAACCCCTCCTTCCAAACGCCTACATTGGCCTCACCTAACAATCCTCCGCAGTCATCAATCGGCACTGCAACAACCACTAACCACGTGAGTGCAGCCAATTCTCCAGCAAATGTTACCTTGCAACAGCCAACACACTCTTCCGAAGTCGATCGAAATGATTCCCGGAGTTCTGTGCAAAAGATTATGCAGGAATACTGGATGTCGAACCAACTAAACGAGATGAATGCAGTGGCTGATGTTTCCTCTCTAACCGGGGATGTGAAACCTGTTAATGCAATGTTGGCAGCAAACAACATTATGAGTCTCAATGGACGGAACTGCCTCGACGGGAATGGAATTGTTAATGGTGTTTCGGGTATTAGGAGCACGGGTTATGGCTCGATGGATGGGGGACTTGCCCAGGCTTCTATGGTCAATGGAATGAAGTCTGCAATGGGAAACAACTCGATTTCGAATGGGAGAAACGGGATAGCGTCCTTGGCTCGAGAACAGAGCATAAATCATCAAGATTTGGGAGAACAGCTCTTTAATGGATATAATAGTCTTCAATTCGATTATTGA | 2622 | 44.13 | MVPSGPSTPIGGPQSVSPSLLRSNSGMMGAHGVPSQSAFPSLVSPQTQFSSMNMLGNQPFGNGVPNYGPSGLGNSHRAGMDSDSGSDPFSLVGNGVNFNNTPSSLVVLNTANVGSSSQVSGPQFSNHSSSQMIPNQQQIEPQNFQHSQHSMQQFTTSNDAQQSQQQHQFQPIRGSSCGVGPVKLEPQMNNNDLQGQQLQNQELQSMMNLGSSPEPQQFQSMRNLGPAQLESQQSDPSLFRQQQHQQQQQQQQLLGMSRQASQAAAAAQINLLQQQRFLQFQHQQQLLKAIHQQRPHFPQQFQQQNFPLRSPVKPVYEPGMCARRLTNYVCRQQQRPGDNNIEFWRDFVSDYFAPHAKKKWCVSMYGNSRQTTGVFPQDVWRCEICNRKPSRGFEATFEVLPRLFKLKYESGTLEELLYVDMPYEYHNSSGQIVLDYAKAIQVSVFEQLRVVRDGKLRIVFSPDVKICSWEFCARRHEELIPRRLLMPQVSQLGAAAQMYQTAIQNASPNLSTPELQNNCNMFVGSARQLAKALEVPLVNDFGYTKRYVRCLQISEVINSMKDLIDYSQETSTGPIESLAKFPRKTNASPGFHSQAQNTVQQLSQPQKIIDQNANGDHSVQAAANNGVPNANNNANQASTSAPVGLHHQNSMNSRHQNSINSGGSPYGRDSAQTSSPGPSTTVAQKQANPSFQTPTLASPNNPPQSSIGTATTTNHVSAANSPANVTLQQPTHSSEVDRNDSRSSVQKIMQEYWMSNQLNEMNAVADVSSLTGDVKPVNAMLAANNIMSLNGRNCLDGNGIVNGVSGIRSTGYGSMDGGLAQASMVNGMKSAMGNNSISNGRNGIASLAREQSINHQDLGEQLFNGYNSLQFDY | 873 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 43447024 | 43454385 | - | Sed0008940.2 | Sed07g2872 | 721736 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed07g2872 | 873 | MobiDBLite | consensus disorder prediction | 61 | 86 | - | - | |
Sed07g2872 | 873 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - | |
Sed07g2872 | 873 | MobiDBLite | consensus disorder prediction | 582 | 602 | - | - | |
Sed07g2872 | 873 | MobiDBLite | consensus disorder prediction | 115 | 134 | - | - | |
Sed07g2872 | 873 | MobiDBLite | consensus disorder prediction | 618 | 711 | - | - | |
Sed07g2872 | 873 | MobiDBLite | consensus disorder prediction | 143 | 173 | - | - | |
Sed07g2872 | 873 | MobiDBLite | consensus disorder prediction | 143 | 189 | - | - | |
Sed07g2872 | 873 | MobiDBLite | consensus disorder prediction | 587 | 602 | - | - | |
Sed07g2872 | 873 | Pfam | LIM-domain binding protein | 324 | 578 | IPR029005 | - | |
Sed07g2872 | 873 | MobiDBLite | consensus disorder prediction | 8 | 24 | - | - | |
Sed07g2872 | 873 | MobiDBLite | consensus disorder prediction | 226 | 254 | - | - | |
Sed07g2872 | 873 | PANTHER | LIM DOMAIN-BINDING PROTEIN | 1 | 844 | IPR029005 | GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed07g2872 | Sed-Chr7:43447024 | Sed10g2090 | Sed-Chr10:37332533 | 0.00E+00 | dispersed | |
Sed07g2871 | Sed-Chr7:43447024 | Sed07g2872 | Sed-Chr7:43447024 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed07g2872 | - | - | - | 0.0 |