Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g2903 ATGCTTGTGTGGGATCATGGATCGCCACTACAGCCGTGTAAATGCCCCTTATGTCGCCGACATATCACTTTATTGGTTCCTTCTGAGGTTTCAGCAACACAGCAAAGTGACCCTGAGGTTTCTCGTGTTCTTAACAATATTAGGACTTATAACCGTCATTTTGGTGGCAGCTCAACTGGTTTAAATCAGCGACTGCGGGACCTTCCTTTTCTTCTACGGAGGTTGCTTCGGGAACTCCTCAATCCGCAGAGATCTCTTCCTCTTGTCATTAGAGCACGTGTTTACATTGCAATGTTCCTAAGTGTAGTCTATGCTGTGAGTCCCATCGATATCATACCTGAAGCATTACTAGGATTATTTGGACTGATGGATGATATCTTTATACTGCTCATCTGCCTACTTTATGTTGCTGCAATATATCGATCGGTTCTCCAAAATCGCCATGGAGGAACTTGA 456 44.08 MLVWDHGSPLQPCKCPLCRRHITLLVPSEVSATQQSDPEVSRVLNNIRTYNRHFGGSSTGLNQRLRDLPFLLRRLLRELLNPQRSLPLVIRARVYIAMFLSVVYAVSPIDIIPEALLGLFGLMDDIFILLICLLYVAAIYRSVLQNRHGGT 151
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 43608578 43611815 + Sed0010548.3 Sed07g2903 721767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g2903 151 PANTHER UNCHARACTERIZED 1 149 IPR038896 GO:0061630(InterPro)
Sed07g2903 151 Pfam Protein of unknown function (DUF1232) 96 130 IPR010652 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g2901 Sed-Chr7:43608578 Sed07g2903 Sed-Chr7:43608578 2.80E-80 dispersed
Sed07g2902 Sed-Chr7:43608578 Sed07g2903 Sed-Chr7:43608578 4.80E-50 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g2903 K15707 - ath:AT1G22510 196.052