Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sed08g0036 | ATGCAGCTCAACTTCGGCATCTCCCTCTTCTTCCTTCTCTGTCTTTCTTTATGTGCTTTCTTTTTTCTTTACCCTTTCATCAGCTGCTTGGTTTCTTTCCACAAAAACCGGCGCCGGCTTCTTAGCTGGTACACCGACCTGCTTTCCGACTCTTCGACCCGGACCATTGTGGTGCACCGGCTCGGTTCGAGGCGGACCATTGTCACGGCCAACCCAGCCAACGTTGAATACATGCTGAAGACTAATTTTGTTAATTACCCTAAAGGGAAGCCGTTCACTGATATACTCGGCGATCTCCTCGGGTGTGGCATTTTCAACGTCGACGGGGACTTGTGGTCAACGCAGCGCAAGCTCGCCAGTCACGAATTTTCTGCTAAGTCTTTGAGGGAATTTGTCGTTAAGATTCTCGAAGACGAAGTTCATCTCCGTTTGATTCCGTTGCTCCAGAATGCTGCCCGGACTAACGGCGTCTTGGATTTGCAAGATGTTCTGGGAAGGCTTGCTTTTGACACCATTTGTAAGGTGAGTCTAGGAAGTGACGAGCAATGTCTGGACATGTCGCGCCCAGTTCCAGCAATACTAAATGCATTCGACACCGCCACGGGGATCAGCGCCAAGCGTGCAATAGCGCCAATCTTTCTGGCGTGGAAAGCCAAGCGCCTCTTCAACATCGGCTCCGAAAAGCAGCTCAAAGAATCGGTCAGAAGGGTCCACTCATGGGTCTCCGACATCATTCGCAACAAAAACCTCGACACCAACAAACCCGCGGGAGACTTGTTGTCTCGGCTGTTATGCGCGGGCAACGACCAAGAAGTTGTCCGAGACATGGTAGTCAGCTTCATAATGGCCGGCCGCGACACCACCTCCGCTGCCATGACGTGGCTCTTCTGGTTGCTTACCAAACACCCCGAAGTCCAAGCCACCCTAATGAACGAAGTGGTTTCCTTGTCTAACAAAACTGCGTCGTTTAATTATGGATATGAAGAATTGAAGGACATGAAGTATTTGAAGGCGTGTTTGTGTGAGTCCATGAGGCTTTACCCGCCCGTGGCTTGGGACTCCAAGCACGCGGCGGCACCCGACGTTCTTCCAGATGGAACTCGGGTGAGGAAAGGGGACAGAGTCACGTATTTTCCCTACGGTATGGGACGGATGGAGGACCTGTGGGGGAAGGACCGGCTCGAATTCAAACCGGACCGGTGGTTCCAAAACGGGGAGTTGAAACCGGTCAGTCCTTTCAAGTTTCCGGTTTTTCAAGCCGGTCCGAGGATGTGCTTGGGAAAGGAAATGGCGTTCATCCAGATGAAATACGTGGTGGCCACGGTTTTGAAGCGGTTTGAATTTAGACCGGTCAGTGAAAGTCCACCAGTATTTGTCCCTTTATTGACAGCTCATATGGCTGGTGGATTACAGGTTTATGTTAGAGAAAGGACAGGACAAAAGTCAACCGTCTGGTGA | 1458 | 51.17 | MQLNFGISLFFLLCLSLCAFFFLYPFISCLVSFHKNRRRLLSWYTDLLSDSSTRTIVVHRLGSRRTIVTANPANVEYMLKTNFVNYPKGKPFTDILGDLLGCGIFNVDGDLWSTQRKLASHEFSAKSLREFVVKILEDEVHLRLIPLLQNAARTNGVLDLQDVLGRLAFDTICKVSLGSDEQCLDMSRPVPAILNAFDTATGISAKRAIAPIFLAWKAKRLFNIGSEKQLKESVRRVHSWVSDIIRNKNLDTNKPAGDLLSRLLCAGNDQEVVRDMVVSFIMAGRDTTSAAMTWLFWLLTKHPEVQATLMNEVVSLSNKTASFNYGYEELKDMKYLKACLCESMRLYPPVAWDSKHAAAPDVLPDGTRVRKGDRVTYFPYGMGRMEDLWGKDRLEFKPDRWFQNGELKPVSPFKFPVFQAGPRMCLGKEMAFIQMKYVVATVLKRFEFRPVSESPPVFVPLLTAHMAGGLQVYVRERTGQKSTVW | 485 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 169980 | 172206 | + | Sed0010583.1 | Sed08g0036 | 721812 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sed08g0036 | 485 | Gene3D | Cytochrome P450 | 20 | 484 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0036 | 485 | Pfam | Cytochrome P450 | 55 | 456 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0036 | 485 | PRINTS | E-class P450 group I signature | 425 | 448 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0036 | 485 | PRINTS | E-class P450 group I signature | 272 | 289 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0036 | 485 | PRINTS | E-class P450 group I signature | 292 | 318 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0036 | 485 | PRINTS | E-class P450 group I signature | 415 | 425 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0036 | 485 | FunFam | Cytochrome P450 | 19 | 480 | - | - | |
| Sed08g0036 | 485 | PRINTS | P450 superfamily signature | 283 | 300 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0036 | 485 | PRINTS | P450 superfamily signature | 416 | 425 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0036 | 485 | PRINTS | P450 superfamily signature | 338 | 349 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0036 | 485 | PRINTS | P450 superfamily signature | 425 | 436 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0036 | 485 | SUPERFAMILY | Cytochrome P450 | 17 | 477 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0036 | 485 | PANTHER | CYTOCHROME P450 | 18 | 470 | - | - | |
| Sed08g0036 | 485 | CDD | CYP86A | 54 | 470 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Sed03g1890 | Sed-Chr3:12820473 | Sed08g0036 | Sed-Chr8:169980 | 2.10E-114 | dispersed | |
| Sed05g0087 | Sed-Chr5:471390 | Sed08g0036 | Sed-Chr8:169980 | 1.20E-114 | dispersed | |
| Sed08g0036 | Sed-Chr8:169980 | Sed08g1486 | Sed-Chr8:29356077 | 2.00E-154 | dispersed | |
| Sed02g0545 | Sed-Chr2:43006251 | Sed08g0036 | Sed-Chr8:169980 | 1.40E-115 | transposed | |
| Sed12g1171 | Sed-Chr12:7820742 | Sed08g0036 | Sed-Chr8:169980 | 6.90E-80 | transposed | |
| Sed12g2502 | Sed-Chr12:34536214 | Sed08g0036 | Sed-Chr8:169980 | 1.70E-233 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sed08g0036 | K20665 | - | csv:101202989 | 763.451 |