Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed08g0262 ATGGTGCATGCGCTTGCAACGGCCAACGAAGGACCGACGATGCTGATGAACTTGCTGACCATGTGCCTTGTAAACAGTCTCGGTCGAACGATGTTCGGGCGACAGGTTTTCGACACCAACGACCCGAAGGTGGAACGGTTTAAGGTGATGGTTGAGCGAATCATGGTGTTGTCCACGACGTTCAACCCGGGCGACTTTTTTCCGTTGCTGGAGTGGCTTGATTTGAACGGTGTTATGGGAGAGATGAAGAAAGTCCATAAATGGTTCGACGATTTCTTGTCGGAGATCGTGGTGGAGCACGAGAGATTATTGGCCCGTGGCGGCGGTGACGACGATTACCGTGACCTGTTGAGCACGCTCCTATGGTCTAGGGATCGGACTGAAGATGAGAATGAGAAGATTACTGACACTGAGATTAAGGCTGTGCTGTTGAATATGTTTGCAGCTGGGACTGACACATCAATGATCGCAGTGGAATGGGCCATGGCAGAGCTCATAAGACACCCGAAACTGATGGCCGAGGCCCAACAAGAACTAGACACCATTGTGGGTCGTGATCGGTTGGTTTCTGAATCAGACCTACCGAAACTAAGCTATCTCCAGGCAGTGGTAAAGGAAACATTACGACTTCACCCCTCGACACCACTCTCCCTCCCCCGCATCGCTGCCGAGAGCTGCGAAATCGACGGCTACCACATTCCTAAGGGCTCCACTCTATTGGTTAGCATTTGGGCCATTGGTCGTGACCCAAAGGAATGGGCCGACCCACTCGAATTCAGGCCCAATAGGTTCCTCCCCGGCGGTAATAAGGACCACATTGATGTGATGGGAAATAATTTTGAGGTGATTCCGTTTGGGGCTGGGCGAAGGATCTGCGCAGGCGTGGGTTTGGGCTTGAGGATGGTCCAGATGTTAACTGCCACGTTGGTCCATTCTTTTGATTGGGCCTTGCCTAATGGGCATGAGCCCAATATGTTAAACATGGACGAGTCATTTGGGCTGGCCATGCGTCGGGCCCAGCCGTTGGTCGTTCATCCTCGACCCAGATTATCGTCTAGAGTTTATCAAGGGTTGTCTTAG 1080 52.04 MVHALATANEGPTMLMNLLTMCLVNSLGRTMFGRQVFDTNDPKVERFKVMVERIMVLSTTFNPGDFFPLLEWLDLNGVMGEMKKVHKWFDDFLSEIVVEHERLLARGGGDDDYRDLLSTLLWSRDRTEDENEKITDTEIKAVLLNMFAAGTDTSMIAVEWAMAELIRHPKLMAEAQQELDTIVGRDRLVSESDLPKLSYLQAVVKETLRLHPSTPLSLPRIAAESCEIDGYHIPKGSTLLVSIWAIGRDPKEWADPLEFRPNRFLPGGNKDHIDVMGNNFEVIPFGAGRRICAGVGLGLRMVQMLTATLVHSFDWALPNGHEPNMLNMDESFGLAMRRAQPLVVHPRPRLSSRVYQGLS 359
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 1543686 1546367 + Sed0004035.1 Sed08g0262 722038
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed08g0262 359 FunFam Putative cytochrome P450 superfamily protein 140 348 - -
Sed08g0262 359 PANTHER CYTOCHROME P450 98A9 2 356 - -
Sed08g0262 359 PRINTS P450 superfamily signature 149 166 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g0262 359 PRINTS P450 superfamily signature 202 213 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g0262 359 PRINTS P450 superfamily signature 283 292 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g0262 359 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 285 294 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Sed08g0262 359 Gene3D Cytochrome P450 1 353 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g0262 359 SUPERFAMILY Cytochrome P450 2 349 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g0262 359 Pfam Cytochrome P450 4 336 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g0262 359 PRINTS E-class P450 group I signature 138 155 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g0262 359 PRINTS E-class P450 group I signature 282 292 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g0262 359 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g0262 359 PRINTS E-class P450 group I signature 158 184 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g0262 359 PRINTS E-class P450 group I signature 292 315 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g0262 359 PRINTS E-class P450 group I signature 242 266 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed08g0262 Sed-Chr8:1543686 Sed08g0264 Sed-Chr8:1559361 4.50E-172 dispersed
Sed08g0261 Sed-Chr8:1528639 Sed08g0262 Sed-Chr8:1543686 2.10E-154 tandem
Sed08g0262 Sed-Chr8:1543686 Sed08g0263 Sed-Chr8:1551488 1.70E-139 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed08g0262 K05280 - csv:101207160 507.294