Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sed08g0264 | ATGGACGAAATTACCCTCGTCGTAATTGCCGCCGTAACCCTGGCCTCCGCCGTCCTCATCCACCGCTGCCTATTCCTCCGACGAAGACTCCGATCGAATCTCCCCCTCCCGCCGGGCCCAAAACCATGGCCGATCGTCGGAAACTTGCCGCAACTCGGCGGAGCGCCGCTCCACTCTCACCTCGCCGCCATGTCCGGCGAGTACGGTCCTCTAATGTACCTCCGATTCGGCTCCGTCGACGTCGTGGTGGCGGCGTCGGCGGCGGTGGCGGAGCAATGCTTGAAGATTCGCGACACTAATTTCCTGAGCCGGCCGCCCAACGCCGGCGCTAAATACATTGCTTATAATTATCAGGACATGGTTTTTGCGCCTTACGGTCCACGGTGGCGGTTGCTCCGGAAGATCAGCGCCGTCCATCTGTTCTCCTCAAAAGCCCTTGATGATCAACGGCTCGTACGCGAGGAAGAGGTATCAGTGCTGGTCCAGGCGCTTGCAACGGCCGGCGAAGCACCAGCGACGTTGATGAGCTTGCTGACCATGTGCCTTGTAAACAATCTCGGTCGAACGATGTTCGGGCGAAGAGTTTTCGGCTGCAGCGACCCGAAGGTGGATCGGTTTAAGGTGATGGTTCAACGAATGATGGTGTTGTCAACAAAGTTTAACCCCGGCGACTTTTTTCCATTACTTGAGTGGCTTGATTTGAACGGTGTTATCAGAGAGATGAAGAAGGTCCATAAATGGTTCGACGATTTCTTGTCGGAGATCGTGTCGGAGCACAAGAGTTCATTGCAGGCCGAGGGCGATTTCGACGAAGGCGAGCACCGTGACTTGTTGAGCACGCTTCTGTGGTTGAGGGATCAAACTGAAGATGAGAATGAGAAGCTTAACGACACTGAAATTAAGGCCTTGTTGTTGAACATGTTTGCGGCTGGAACTGACACGTCAACAATCGCAGTGGAATGGGTGATGGCAGAGCTCATGAGACACCCGAAAATGATGGCCCAGGCTCAACAAGAAGTAGACTCTATAGTGGGTCGTGATCGGTTAGTGTCCGAACTAGATCTGCCGCAACTTACCTATCTCCAGGCGGTGGTGAAGGAAACATTACGGCTCCACCCACCGACGCCGCTCTCCCTTCCTCGCATCGCCACCGAGAGTTGCAAAATCAACGGCTACCATATCCCAAAGGGCTCCACTCTATTGGTCGACGTTTGGGCCATCGGTCGTGACCCGAAGGAATGGGCCAACCCGCTCGAATTCAGGCCCAATAGGTTCCTCCCTGGTGGCGAAAAGGCCCATGTCGATGTGAAGGGAAATGACTTTATGGTGATTCCGTTTGGGGCTGGGCGAAGGATCTGCGCAGGATTGGGTTTGGGCCTAAGGATGGTTCAGATGTTAACAGCCACGCTGATCCATTCATTTGATTGGGCCTTGCCGAATGGGCTTGAGCCCAATATGTTGAACATGGATGAGGCATTTGGATTGGCCCTGCGTCGGGCCCAGCCCTTGGTTGTTCATCCTCAGCCCAGGTTATCGCATGGGGTTTATCAAGGATCGTCTTAA | 1563 | 54.51 | MDEITLVVIAAVTLASAVLIHRCLFLRRRLRSNLPLPPGPKPWPIVGNLPQLGGAPLHSHLAAMSGEYGPLMYLRFGSVDVVVAASAAVAEQCLKIRDTNFLSRPPNAGAKYIAYNYQDMVFAPYGPRWRLLRKISAVHLFSSKALDDQRLVREEEVSVLVQALATAGEAPATLMSLLTMCLVNNLGRTMFGRRVFGCSDPKVDRFKVMVQRMMVLSTKFNPGDFFPLLEWLDLNGVIREMKKVHKWFDDFLSEIVSEHKSSLQAEGDFDEGEHRDLLSTLLWLRDQTEDENEKLNDTEIKALLLNMFAAGTDTSTIAVEWVMAELMRHPKMMAQAQQEVDSIVGRDRLVSELDLPQLTYLQAVVKETLRLHPPTPLSLPRIATESCKINGYHIPKGSTLLVDVWAIGRDPKEWANPLEFRPNRFLPGGEKAHVDVKGNDFMVIPFGAGRRICAGLGLGLRMVQMLTATLIHSFDWALPNGLEPNMLNMDEAFGLALRRAQPLVVHPQPRLSHGVYQGSS | 520 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 1559361 | 1562721 | + | Sed0019758.1 | Sed08g0264 | 722040 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sed08g0264 | 520 | FunFam | Cytochrome P-450 19 | 25 | 508 | - | - | |
| Sed08g0264 | 520 | Pfam | Cytochrome P450 | 37 | 495 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0264 | 520 | PANTHER | CYTOCHROME P450 98A9 | 6 | 517 | - | - | |
| Sed08g0264 | 520 | PRINTS | E-class P450 group I signature | 443 | 453 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0264 | 520 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0264 | 520 | PRINTS | E-class P450 group I signature | 89 | 110 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0264 | 520 | PRINTS | E-class P450 group I signature | 362 | 380 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0264 | 520 | PRINTS | E-class P450 group I signature | 403 | 427 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0264 | 520 | PRINTS | E-class P450 group I signature | 453 | 476 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0264 | 520 | PRINTS | E-class P450 group I signature | 65 | 84 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0264 | 520 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0264 | 520 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0264 | 520 | PRINTS | P450 superfamily signature | 363 | 374 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0264 | 520 | PRINTS | P450 superfamily signature | 444 | 453 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0264 | 520 | Gene3D | Cytochrome P450 | 29 | 514 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0264 | 520 | SUPERFAMILY | Cytochrome P450 | 37 | 510 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed08g0264 | 520 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 446 | 455 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Sed08g0261 | Sed-Chr8:1528639 | Sed08g0264 | Sed-Chr8:1559361 | 5.70E-245 | dispersed | |
| Sed08g0262 | Sed-Chr8:1543686 | Sed08g0264 | Sed-Chr8:1559361 | 4.50E-172 | dispersed | |
| Sed08g0264 | Sed-Chr8:1559361 | Sed10g0891 | Sed-Chr10:6721021 | 5.40E-102 | dispersed | |
| Sed08g1105 | Sed-Chr8:21157509 | Sed08g0264 | Sed-Chr8:1559361 | 3.50E-64 | dispersed | |
| Sed09g0579 | Sed-Chr9:6589623 | Sed08g0264 | Sed-Chr8:1559361 | 3.50E-64 | dispersed | |
| Sed08g0263 | Sed-Chr8:1551488 | Sed08g0264 | Sed-Chr8:1559361 | 7.00E-224 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sed08g0264 | K05280 | - | csv:101207160 | 763.066 |