Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed08g0381 ATGGCAAAGGGAAAACTTGTCTCTGACAAAATCAAGCTCATTCTTGCCTTGATTGCCTTGCAGTTCTGCTATGCAGGGTTTCACATTGTGTCAAGAGTTGCTTTAAACATTGGTGTCAGTAAAGTCGTCTATCCCGTGTATCGAAATGCGATCGCTTTAGCTCTGTTGAGTCCTTTTGCTTATTTTCTAGAGAAAAATGAAAGATCACCTCTTACTTTATCATTGCTGTTTCAGTTCTTCCTTTTAGCTTTACTGGGGATCACTGCCAATCAAGGATTCTATTTATTGGGACTAAACTATGCATCTCCAACTTTTGCTTCTGCAATGCAAAACTCAGTTCCTGCAATTACCTTTGTGATGGCTTCTGTTTTGAGGCTTGAGCAAGTCAACTTCAGGAGGAGAGATGGTTTGGCAAAGCTTTTGGGAACCATTGGGAGTGTTGGAGGAGCAACTGTGATCACTCTCTATAGAGGCCCTCCACTTTTTCACAACTACTTAACTCAAGGAAGTAGCATCTTAGGGATGGATGACCCTACAATTAAAGTGCAAAATTGGACATGGGGTTGCATATACCTACTAGGCCACTGCCTATCTTGGGCTGGTTGGATGGTTTTTCAGGCTTCTGTATTGAAAAAGTATCCAGCAAAGCTAACATTAACTTCATACACATGCTTCTTTGGACTGATCCAATTCTTAGTCATAGCTGGCTTTGTGGAAACAGATTATCAGTACTGGAAAATCCAATCAGCAGAAGAACTCTTCACAATCTTATATGCTGGTATTGTAGCCTCTGGCATTGTCATATCTCTCCAAACATGGTGCATTCACAAAAGTGACCCTGTCTTTGTTGCTGTCTTCCAGCCTCTCCAAACTTTCCTTGTAGCCATCATGGCGTTCCTCATCCTCGGCGATCGGTTATTCTCCGGCGGGGTTATTGGTGCTGTCATTATAACAGTTGGGCTTTACTTAGTTTTGTGGGGCAAAAGTGAAGAAAAGGCATTGGAAGAACAAGACAAGTCTTTGAAACAGCCCCTTTTGGATGACCAAAAAGAGGACAAAGAAGAGCTTGTTGTTTCAGACATACCATGA 1089 42.06 MAKGKLVSDKIKLILALIALQFCYAGFHIVSRVALNIGVSKVVYPVYRNAIALALLSPFAYFLEKNERSPLTLSLLFQFFLLALLGITANQGFYLLGLNYASPTFASAMQNSVPAITFVMASVLRLEQVNFRRRDGLAKLLGTIGSVGGATVITLYRGPPLFHNYLTQGSSILGMDDPTIKVQNWTWGCIYLLGHCLSWAGWMVFQASVLKKYPAKLTLTSYTCFFGLIQFLVIAGFVETDYQYWKIQSAEELFTILYAGIVASGIVISLQTWCIHKSDPVFVAVFQPLQTFLVAIMAFLILGDRLFSGGVIGAVIITVGLYLVLWGKSEEKALEEQDKSLKQPLLDDQKEDKEELVVSDIP 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2303753 2306686 + Sed0026718.1 Sed08g0381 722157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed08g0381 362 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020(InterPro)
Sed08g0381 362 Pfam EamA-like transporter family 13 132 IPR000620 GO:0016020(InterPro)
Sed08g0381 362 PANTHER WAT1-RELATED PROTEIN 16 338 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Sed08g0381 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Sed08g0381 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 329 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g2398 Sed-Chr5:36380631 Sed08g0381 Sed-Chr8:2303753 1.70E-58 dispersed
Sed08g0381 Sed-Chr8:2303753 Sed11g1065 Sed-Chr11:26042393 4.50E-111 dispersed
Sed08g0381 Sed-Chr8:2303753 Sed03g1722 Sed-Chr3:11247621 1.20E-111 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed08g0381 - - - 0.0