Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed08g0507 ATGCAGAGGCAGACGAGGTATATGGAGAGGACAAACTCCATGAGGGAGAAACGGGGCTTGGATGGCGGAGAAGATGAACTGCCGGAGCGAAAGCGACCAGCTCTTGCTAGTGTGATTGTAGAAGCCCTGAAGGTGGATAGCTTACAGAAGCTCTGCTCATCATTGGAACCAATACTTCGTAGAGTGGTTAGTGAGGAAGTGGAACGTGCTTTGGCTAAGATAGGTCCTGCTAGAATTACTGGAAGGTCTTCTCCTAAAAGGATCGAAGGTCCTGATGGAAGAAACTTGCAACTGCAGTTTAGGTCTAGATTGTCTCTTCCGCTATTCACTGGAGGGAAAGTAGAAGGTGAACAGGGTGCAGCAATCCATGTTGTTCTGCTTGATGCCAACACAGGCATTGTAGTACCGTCTGGACCTGAAGCCTTGGCAAAATTAGACATTGTGGTACTTGAAGGTGATTTCAACAATGAAGATGATGAAGATTGGACGGAGGAAGAATTTGAAAGTCATGTGGTAAAAGAGCGTGAAGGAAAAAGGCCTCTATTGACTGGTGACCTGCAGGTTACTCTCAAGGAAGGTGTTGGAACTCTAGGGGATCTGACTTTCACTGATAACTCGAGTTGGATTAGGAGCAGAAAGTTCAGACTTGGGTTAAAGGTGGCTTCAGGGTTTTGTGAAGGTGTACGCATTCGTGAAGCAAAAACTGAAGCTTTTACAGTTAAAGATCATCGGGGAGAATTGTATAAAAAACATTACCCACCTGCATTAAGCGATGAGGTGTGGAGACTGGAGAAAATTGGAAAGGACGGTTCATTTCACAAACGACTGAATAAACAGGGAATACACTCTGTTGAAGACTTTCTCAGAATGGTGGTTCGGGATTCTCAAAAACTACGAAGTATTCTTGGAAGTGGGATGTCAAATAAGATGTGGGAGGCTCTTTTAGAACATGCTAAGACCTGTGTTCTGAGTGGGAAGCTGTATATTTATTATCCAGAGGAAACCAGAAATGTTGGTGTTGTTTTTAACAACATCTATGAGCTCAACGGCCTGATTACAGGGGAACAATACTTTTCTGCCGACTCTCTTTCTGATAGTCAGAAGGTATTTGTAGATACGCTAGTGAATAAAGCGTATGAAAATTGGAATCAAGTCGTAGAGTATGATGGAAAATCACTTTTGAGCTCTAAGCAGTCTAAGAAGTTCAATGCACCCCGAAATGACTTTCAAGGAGGTCATCTTGATCTTTCTAATAATCTAGACCATGGGTCACTATCCCGCATGCCAGTAGCAGTTCATCCTCAGCAGCCTGTAGTGGATCCAGAACTCTCAGTTACAGGGTATAATGATAATTCAACTCCAAGATATTCAACGCAGCCTCAGTTTGCGAATCCAACTTCTCGACCCCAATATGACAACACCTCATTTACTACAAACGAGTTGATCGGCAGTTCTAACCATGGTCATATCACAAGAAACGACAATAGTGCATTTGGTTTGGCTCTTGGTCCTCCTCAAGCATCCTCTTCAGGGTTTCAGATGCTTGGTTCTTCAGTTCAGGAATCTAATATGAATCCATTTGAGTGGTCAAACCATAGAGACAAGGGAGTTGACGACTACTTTACGGAGGATGAGATTCGTATGAGAAGTCATGAGATGCTGGAAAATGAAGATATGCAACAATTGTTGCGAATGTTTAGCATTGGAGCGCATGGGTCTGTTAATGGCCATGATGATGGTTTTTCATTCCCATCATTCATGCCTTCACCATTGCCAAATTTCGATGATCGCAACCGTTCTGGAAAAGCTGTGGTAGGTTGGTTGAAGATCAAAGCTGCAATGAGGTGGGGGTTCTTCATCAGGAAGAAAGCAGCCGAGAGACGACGTGCACAGATTGTCGAGTTGGACGAGGAATAG 1917 43.77 MQRQTRYMERTNSMREKRGLDGGEDELPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKIGPARITGRSSPKRIEGPDGRNLQLQFRSRLSLPLFTGGKVEGEQGAAIHVVLLDANTGIVVPSGPEALAKLDIVVLEGDFNNEDDEDWTEEEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGFCEGVRIREAKTEAFTVKDHRGELYKKHYPPALSDEVWRLEKIGKDGSFHKRLNKQGIHSVEDFLRMVVRDSQKLRSILGSGMSNKMWEALLEHAKTCVLSGKLYIYYPEETRNVGVVFNNIYELNGLITGEQYFSADSLSDSQKVFVDTLVNKAYENWNQVVEYDGKSLLSSKQSKKFNAPRNDFQGGHLDLSNNLDHGSLSRMPVAVHPQQPVVDPELSVTGYNDNSTPRYSTQPQFANPTSRPQYDNTSFTTNELIGSSNHGHITRNDNSAFGLALGPPQASSSGFQMLGSSVQESNMNPFEWSNHRDKGVDDYFTEDEIRMRSHEMLENEDMQQLLRMFSIGAHGSVNGHDDGFSFPSFMPSPLPNFDDRNRSGKAVVGWLKIKAAMRWGFFIRKKAAERRRAQIVELDEE 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3327510 3334607 - Sed0008073.1 Sed08g0507 722283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed08g0507 638 MobiDBLite consensus disorder prediction 9 29 - -
Sed08g0507 638 MobiDBLite consensus disorder prediction 1 29 - -
Sed08g0507 638 Pfam Calmodulin binding protein C-terminal domain 326 388 IPR046829 -
Sed08g0507 638 Pfam Calmodulin binding protein central domain 256 321 IPR046830 -
Sed08g0507 638 PANTHER OS02G0177800 PROTEIN 14 629 IPR012416 GO:0003700(PANTHER)|GO:0005516(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:0080142(PANTHER)
Sed08g0507 638 Pfam Calmodulin binding protein-like N-terminal domain 96 243 IPR046831 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g1946 Sed-Chr3:13527081 Sed08g0507 Sed-Chr8:3327510 1.10E-61 dispersed
Sed08g0507 Sed-Chr8:3327510 Sed08g0509 Sed-Chr8:3327510 0.00E+00 dispersed
Sed08g0507 Sed-Chr8:3327510 Sed08g0508 Sed-Chr8:3327510 0.00E+00 tandem
Sed12g2225 Sed-Chr12:32641582 Sed08g0507 Sed-Chr8:3327510 2.40E-76 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed08g0507 - - - 0.0