Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed08g0706 ATGAACAACAATCCGCCGTGGTTGGAATCACTCAAATTCCAGCTACTATGCGCCGTCGTGTTGATACTAGCCGCGAAAATGGCGGCGGCGCTATGGTGGGGGCCGAGAAGAATCGAGCAACACTTCATGAGGCAAGGAATTCGTGGCCCTCCTTATCGTTTCTTCATTGGGAACTTCAAAGAACTTGTGTCTATGATGCTTGCTGCTTCTTCCGATCCAATGCCGACTTTCTCCCACAATATTCTTCCTCGCGTTCTTTCGTTTTATCATCATTGGAAGAAGATCTACGGTTCGACATTTTTGATATGGTTCGGACCTATTGTTCGAGTAGCGGTTTCGGACCCGGATATGATTCGAGAAATTTTGACAACCAATTCCGAATTCTACGAGAAAAATGAAGCTCATCCTCTGGTTCGGCAGCTCGAAGGCGATGGCCTCCTTACTCTCAAGGATCATAAATGGGCTCTCCATCGCAAAATCATTTCCCCCACTTTCCACATGGAGAATCTCAAATTGTTGATTCCAGTGGTGGAGGAGAGTGTGGTTGATATGGTCGAGAAATGGTCAGCCATGGCCACCGCCAACGCCTCCGACGAGATCGAGATAGAGGTTTTCGATTGCTTTCAAATCCTAACCGAAGACGTCATCACGAAAACAGCATTCGGAAGTAGCTATGAGGATGGTAAGGCCATTTTCAAGCTTCAAACTCAACAAATGATATTAGCATCCGAAGCCTTTCAAAAGGTCTTCATTCCTGGCTATAGATATTTGCCGACAATGACGAATATTAATTCCTGGAAATTAGAGAAGGAAATAAGGAAATCATTGATGAAATTGATTGAGGGTCGAAAAGAGAATTCAGAGAAAATGTGGGCAATGAATGAAAAAGGAGCAAAAGATTTATTAGGGCTGATGATTCAAGCGTCCAGCTCACCATCTTGTTCTTCATTAAATAATAATATCTCTGTCCACGACATCGTCGAAGAATGCAAAAGCTTCTTCTTCGCTGGCAAACAGACGACTTCGAATCTGCTGACGTGGACTACTGTGTTGCTGGCAATGCATCCACAGTGGCAAATTCTGGCACGTGAGGAGGTCCTTAGCGTGTGCGGCCCACGTGAGCTCCCTTCCAGAGATGACGTTTCTAAGTTGAAGATCTGGCTACGATCCGACGTGCGAAGGCAGACGTGGAGCTAG 1197 45.7 MNNNPPWLESLKFQLLCAVVLILAAKMAAALWWGPRRIEQHFMRQGIRGPPYRFFIGNFKELVSMMLAASSDPMPTFSHNILPRVLSFYHHWKKIYGSTFLIWFGPIVRVAVSDPDMIREILTTNSEFYEKNEAHPLVRQLEGDGLLTLKDHKWALHRKIISPTFHMENLKLLIPVVEESVVDMVEKWSAMATANASDEIEIEVFDCFQILTEDVITKTAFGSSYEDGKAIFKLQTQQMILASEAFQKVFIPGYRYLPTMTNINSWKLEKEIRKSLMKLIEGRKENSEKMWAMNEKGAKDLLGLMIQASSSPSCSSLNNNISVHDIVEECKSFFFAGKQTTSNLLTWTTVLLAMHPQWQILAREEVLSVCGPRELPSRDDVSKLKIWLRSDVRRQTWS 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5173316 5175452 + Sed0019608.1 Sed08g0706 722482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed08g0706 398 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 386 IPR050665 GO:0004497(PANTHER)|GO:0010268(PANTHER)|GO:0016131(PANTHER)
Sed08g0706 398 SUPERFAMILY Cytochrome P450 49 385 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g0706 398 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g0706 398 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g0706 398 PRINTS E-class P450 group I signature 325 342 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g0706 398 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g0706 398 Gene3D Cytochrome P450 33 387 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g0706 398 Pfam Cytochrome P450 86 385 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g2033 Sed-Chr7:35320373 Sed08g0706 Sed-Chr8:5173316 2.60E-29 dispersed
Sed08g0706 Sed-Chr8:5173316 Sed10g1426 Sed-Chr10:30418838 3.70E-151 dispersed
Sed12g2390 Sed-Chr12:33773706 Sed08g0706 Sed-Chr8:5173316 1.10E-177 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed08g0706 K15639 - csv:101213466 604.364