Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed08g0895 ATGAGTGGACCAGTTAACATAATTGTTGGTTCTCATGTCTGGATTGAAGATCCAAAACTAGCGTGGATTGATGGTGAAGTTTTTCGCATCAATGGTGAGGAAGTTCACGTCCGTGCTACAAATGGGAAAACGGTTGTTGCGAATATATCGAAAATATTCCCCAAGGATACTGAAGCACCTGCCGCGGGTGTTGATGACATGACAAAGCTATCATACTTGCATGAACCTGGAGTTCTGAGCAACTTGGCTACCAGATATGAACTCAATGAAATCTATACATACACTGGAAATATACTTATTGCAATAAATCCATTCCAAAGATTGCCCCATCTGTATGATACTCACATGATGGAACAATATAAAGGAGCTGGATTTGGAGAACTAAGTCCTCATGTCTTTGCCGTTGCTGAAGTGGCATACAGGGAAATGATTAATGAAGGAAAAAGCAATTCAATCCTAGTCAGTGGAGAAAGTGGGGCTGGTAAGACTGAGACCACGAAGATGCTCATGCGGTATCTTGCATACCTTGGAGGTCGATCTGGAGTGGAAGGTCGAACAGTCGAACAGCAAGTCTTGGAGTCCAATCCAGTTCTTGAAGCATTTGGCAATGCAAAAACCGTTAGGAACAATAATTCAAGTCGCTTTGGTAAATTTGTTGAGATTCAATTTGACAAGAGTGGGAGAATATCTGGGGCCGCGGTCCGAACTTATTTGCTTGAAAGGTCTCGAGTATGTCAGATCTCAGATCCCGAAAGAAACTACCATTGCTTTTACCTTCTCTGTGCTGCTCCTCCTGAGGAAAGAGAGAAGTATAAATTAGAAAACCCTAAATCATTCCACTACTTAAATCAATCTAACTGCTTTGAGTTGGATGGAGTGAACGATGCCCATGAATATATTGCAACCAGAAGGGCTATGGATATAGTTGGAATTAGCGAGGAGGAGCAGGAGGCAATTTTTAGGATTGTGGCTGCAATTTTGCATCTTGGAAATATTGAATTTGCAAAAGGAGAGGAGATTGATTCTTCTGTCATTAAGGATGAAAAATCCAAATTCCATCTTCATACCACTGCTGAACTGCTCAAGTGTGATGCAAAGAGTTTGGAAGTTGCACTGATTCAACGTGTTATGGTAACACCAGAAGAGGTTATAACTCGAACCCTTGATCCTGTGGCTGCATTGGGTAGTAGGGATGCTTTGGCTAAAACAATTTATTCAAGGCTCTTTGACTGGCTCGTAGAGAAGATTAACAATTCAATTGGGCAAGACCCTAATTCTAAATCATTGATTGGAGTTCTGGATATATATGGATTTGAGAGTTTTAAATTCAACAGTTTTGAACAGTTCTGCATCAATTTTACAAATGAAAAACTGCAGCAACATTTCAATCAGCATGTTTTCAAAATGGAGCAAGAGGAATATACCAAAGAGCAAATCAATTGGAGTTACATTGAGTTTGTTGATAACAAGGATGTCTTGGATCTCATTGAAAAGAAACCTGGAGGAATTATCGCACTTCTGGATGAGGCCTGCATGTTTCCTAAATCCACACACGAAACATTTGCTCAGAAGTTATACCAGACTTTCAAGAACCACAAGCGCTTCATTAAGCCTAAGCTATCTCGTACTAGTTTCACAATATCTCATTATGCTGGCGAGGTGACTTATTTGGCAGATCTATTCTTGGACAAAAACAAAGACTATGTTGTAGCAGAACATCAGGCCCTATTAACAGCCTCAAAATGCTCCTTTGCTAGAGCTCTATTTCCTCCTCTACCAGTGGAAACAGCAAAAGCCTCAAAATTTTCTTCCATTGGTTCACAATTTAAACTACAACTTCAATCTTTAATGGAGACCTTAAATTCAACAGAACCTCACTACATCAGATGTGTAAAGCCAAATAATGTGCTCAAGCCTGCTATTTTTGAGAACTCAAATGTCATCCAACAATTACGTTGTGGTGGTGTTCTTGAAGCAATTAGGATCAGCTGTGCTGGATATCCTACGAGAAGAACATTTTATGAGTTCCTCCTACGTTTTGGCGTTCTTGCACCTGAAGTTTTGGATGGAAACTATGATGACAAGGTAGCATGCCAGATGATCCTGGATAAAATGGGATTGAAAGGTTATCAGATTGGTAAGACAAAAGTTTTTCTGAGGGCTGGCCAGATGGCTTCTTTGGATGCCAAGAGAACAGAGATGCTTAGCAATGCTGCCAGAACTATTCAAATGCAAATTCGAACATATATTGCACGCAAGGAGTTTGTTGCATTACGTAAAGCTGCTATAGAAGTGCAATCATTTACTCGAGGTGTATTGGCTCGAAAACTCTTTGAGCAGCTGCGTCGTGAAGCAGCAGCTTTAAGAATCCAGAAGTGTTTCAAGCGATATATTGCCAGGAAATCATACTTAGATTTGCTCTCATCTGCAACCAAAATTCAAACAGGGTTGAGGGCAATGAAGGCTCGTGATGATTTCAGATTTAGAAAGCGTACTAAGGCAGCAATTATCATTCAGGCACGTTTGCGTTGTCACCTGGCATATTCTTACTATACGAGACTCCAAAAGGCTACATTATACACACAGTGTTGTTGGAGGCGACGAGTTGCACGAAAGGAGCTAAGAACACTGAAAATGGCTGCAAGAGAAACTGGTGCACTCAAAGAAGCAAAAGACAAACTAGAAAAACGTGTAGAAGAACTCACGTGGCGCTTGCAACTTGAGAAGCGGCTGAGGACTGATCTGGAAGAGGAGAAAGCCCAAGAAATTGCCAAATTACAAGATGCTTTACGCAGTACGCAATTACAAGTTGAAGAAGCAAATGCTGAAGTTATCAAAGAGCGAGAGGCAGCTCGGAAAGCTATTGAAGAAGCACCTCCAGTTGTTAAGGAAACTCCAGTTTTTGTTGAGGATACTGAGAAAATTAATTCCTTAATGGCTGAGGTGGAGAATCTGAAGGCTTCACTACTGTCAGAAAAAAAGACTGCTGAAGAGACTAGAAAAGCCTGTACGGATGCTGAAGCTAAAAATGTTGAGCTGTCTAAAAAACTTCAAGATGCAGACCAGAAGTTGGATCAACTTCAGGAGTCAGTGCAGAGGCTTGAAGAGAAGCTTTCAAATTCAGAATCAGAGAACCAGGTACTTCGTCAGCAAGCCTTGACCATGTCGCCAAAAGCTTTATCTGCTAGACCGAAGTCCATGATTATTCAGAGAACACCCGAGAATGGAAATATTCTACATGGAGAGCCCAAAGTATCAACGGATACAACTCTTGCAGTATCTAATCTACGCGAGCCAGAATCTGAGGAAAAACCACAGAAATCACTTAATGAAAAGCAGCAGGAGAACCAAGACCTGCTAGTGAAGTGCATATCACAGGATTTGGGATTTTCTGGAGGCAAACCAGTTGCTGCTTGTGTCATATACAAATGTCTTCTTCACTGGAGGTCATTTGAAGTTGAAAGAACCAGCATATTCGACCGAATAATTCAAACAATAGCTTCATCCATAGAGGTCCAGGATAACAATGATGTATTAACTTATTGGTTATCTAATACATCAACACTATTGTTGCTTCTTCAACATACTCTCAAAGCAAGTGGAGCTGCTAGCTTGACTCCTCAAAGGAGGAGAACTACTTCAGCTTCTCTTTTTGGAAGGATGTCTCAAGGATTGAGGGCATCTCCACAAAGTGGTGGACTATCATTTCTAAATGGTCGGGCACTTGGTAGATTGGACGATTTTCGGCAGGTTGAGGCAAAGTATCCAGCACTATTGTTTAAACAGCAGCTTACAGCATTTTTGGAGAAAATATATGGAATGATAAGAGACAACTTAAAGAAAGAGATCTCTCCTTTACTTGGATTATGCATTCAGGCTCCTAGGACATCACGTACAAGCTTAGTGAAAGGACGCTCCCAAGCTAATGCTATGGCTCAGCAAGCATTAATTGCTCATTGGCAAAGCATTGTAAAAAGTTTAAACAATTACTTGAAGATCATGAAAGCAAACTATGTACCTCCATTCTTAGTCCGCAAAGTCTTCACTCAGATATTCTCGTTTATTAACGTTCAACTATTTAACAGCCTTCTTTTGCGGCGTGAGTGTTGTTCCTTTAGCAATGGAGAGTATGTGAAGGCTGGCTTGTCTGAATTAGAACAGTGGTGTTCTGGAGCAACCGAGGAATATGCAGGGCATGCTTGGGATGAGTTAAGGCATATTAGGCAGGCAGTTGGATTCCTTGTTATACATCAAAAGCCCAAAAAGACCCTGAATGAGATAACCAAAGATCTATGTCCTGTGCTTAGCATACAACAGTTATATAGGATCAGTACAATGTACTGGGATGACAAATATGGCACACATAGTGTATCTTCAGAAGTTATTTCGACTATGCGAATGCTGATGACTGAAGACGCCAACAATGCTATTAGCTCATTCCTGTTAGATGATGACTCTAGTATCCCATTTTCTGTGGATGATATTTCCAAATCAATGAAACAAATAGAAGTAACAGACATTGATCCTCCACCGCTGATACGAGAAAACTCTGGTTTCGGGTTTTTGCTTCAACGTGCAGAGTAA 4584 40.79 MSGPVNIIVGSHVWIEDPKLAWIDGEVFRINGEEVHVRATNGKTVVANISKIFPKDTEAPAAGVDDMTKLSYLHEPGVLSNLATRYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAGFGELSPHVFAVAEVAYREMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAVRTYLLERSRVCQISDPERNYHCFYLLCAAPPEEREKYKLENPKSFHYLNQSNCFELDGVNDAHEYIATRRAMDIVGISEEEQEAIFRIVAAILHLGNIEFAKGEEIDSSVIKDEKSKFHLHTTAELLKCDAKSLEVALIQRVMVTPEEVITRTLDPVAALGSRDALAKTIYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQINWSYIEFVDNKDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNHKRFIKPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQALLTASKCSFARALFPPLPVETAKASKFSSIGSQFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPAIFENSNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFLLRFGVLAPEVLDGNYDDKVACQMILDKMGLKGYQIGKTKVFLRAGQMASLDAKRTEMLSNAARTIQMQIRTYIARKEFVALRKAAIEVQSFTRGVLARKLFEQLRREAAALRIQKCFKRYIARKSYLDLLSSATKIQTGLRAMKARDDFRFRKRTKAAIIIQARLRCHLAYSYYTRLQKATLYTQCCWRRRVARKELRTLKMAARETGALKEAKDKLEKRVEELTWRLQLEKRLRTDLEEEKAQEIAKLQDALRSTQLQVEEANAEVIKEREAARKAIEEAPPVVKETPVFVEDTEKINSLMAEVENLKASLLSEKKTAEETRKACTDAEAKNVELSKKLQDADQKLDQLQESVQRLEEKLSNSESENQVLRQQALTMSPKALSARPKSMIIQRTPENGNILHGEPKVSTDTTLAVSNLREPESEEKPQKSLNEKQQENQDLLVKCISQDLGFSGGKPVAACVIYKCLLHWRSFEVERTSIFDRIIQTIASSIEVQDNNDVLTYWLSNTSTLLLLLQHTLKASGAASLTPQRRRTTSASLFGRMSQGLRASPQSGGLSFLNGRALGRLDDFRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRTSLVKGRSQANAMAQQALIAHWQSIVKSLNNYLKIMKANYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLSELEQWCSGATEEYAGHAWDELRHIRQAVGFLVIHQKPKKTLNEITKDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISTMRMLMTEDANNAISSFLLDDDSSIPFSVDDISKSMKQIEVTDIDPPPLIRENSGFGFLLQRAE 1527
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 7500253 7516303 + Sed0001595.1 Sed08g0895 722671
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed08g0895 1527 Gene3D - 667 730 - -
Sed08g0895 1527 Gene3D Kinesin motor domain 65 662 IPR036961 -
Sed08g0895 1527 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Sed08g0895 1527 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Sed08g0895 1527 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Sed08g0895 1527 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Sed08g0895 1527 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Sed08g0895 1527 Gene3D - 439 623 - -
Sed08g0895 1527 Pfam IQ calmodulin-binding motif 759 778 IPR000048 GO:0005515(InterPro)
Sed08g0895 1527 Pfam IQ calmodulin-binding motif 832 851 IPR000048 GO:0005515(InterPro)
Sed08g0895 1527 Pfam IQ calmodulin-binding motif 737 755 IPR000048 GO:0005515(InterPro)
Sed08g0895 1527 Pfam IQ calmodulin-binding motif 785 803 IPR000048 GO:0005515(InterPro)
Sed08g0895 1527 ProSiteProfiles IQ motif profile. 806 835 - -
Sed08g0895 1527 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Sed08g0895 1527 ProSiteProfiles IQ motif profile. 735 764 - -
Sed08g0895 1527 ProSiteProfiles IQ motif profile. 758 787 - -
Sed08g0895 1527 SMART DIL_2 1346 1453 IPR002710 -
Sed08g0895 1527 FunFam Myosin XI D 667 730 - -
Sed08g0895 1527 ProSiteProfiles IQ motif profile. 831 858 - -
Sed08g0895 1527 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Sed08g0895 1527 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Sed08g0895 1527 Coils Coil 877 957 - -
Sed08g0895 1527 Coils Coil 975 1051 - -
Sed08g0895 1527 FunFam Class V myosin 439 582 - -
Sed08g0895 1527 CDD MYSc_Myo11 76 720 IPR036018 -
Sed08g0895 1527 ProSiteProfiles IQ motif profile. 783 812 - -
Sed08g0895 1527 SMART MYSc_2a 56 733 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Sed08g0895 1527 FunFam unconventional myosin-Va 833 881 - -
Sed08g0895 1527 Gene3D - 785 832 - -
Sed08g0895 1527 Gene3D - 833 882 - -
Sed08g0895 1527 Gene3D - 733 784 - -
Sed08g0895 1527 Pfam DIL domain 1346 1450 IPR002710 -
Sed08g0895 1527 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 883 IPR027417 -
Sed08g0895 1527 CDD MyosinXI_CBD 1111 1493 IPR037975 GO:0007015(InterPro)
Sed08g0895 1527 FunFam unconventional myosin-Va 737 785 - -
Sed08g0895 1527 FunFam Myosin 2 312 426 - -
Sed08g0895 1527 PANTHER MYOSIN 12 1469 - GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER)
Sed08g0895 1527 SMART iq_5 853 875 IPR000048 GO:0005515(InterPro)
Sed08g0895 1527 SMART iq_5 757 779 IPR000048 GO:0005515(InterPro)
Sed08g0895 1527 SMART iq_5 805 827 IPR000048 GO:0005515(InterPro)
Sed08g0895 1527 SMART iq_5 830 852 IPR000048 GO:0005515(InterPro)
Sed08g0895 1527 SMART iq_5 734 756 IPR000048 GO:0005515(InterPro)
Sed08g0895 1527 SMART iq_5 782 804 IPR000048 GO:0005515(InterPro)
Sed08g0895 1527 Pfam Myosin N-terminal SH3-like domain 9 51 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Sed08g0895 1527 Gene3D - 252 310 - -
Sed08g0895 1527 ProSiteProfiles Dilute domain profile. 1160 1471 IPR002710 -
Sed08g0895 1527 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 785 IPR027417 -
Sed08g0895 1527 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Sed08g0895 1527 FunFam Myosin heavy chain 252 307 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g2629 Sed-Chr7:41760282 Sed08g0895 Sed-Chr8:7500253 2.90E-143 dispersed
Sed08g0895 Sed-Chr8:7500253 Sed11g0201 Sed-Chr11:1805906 0.00E+00 dispersed
Sed08g0895 Sed-Chr8:7500253 Sed08g1586 Sed-Chr8:30963986 0.00E+00 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed08g0895 K10357 - csv:101204300 2830.05