Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed08g0922 ATGGACTCCATGGCTAGATTTCTAATACTTTCTCTTCTTCTTCTTCTTCTTCTTCCTTGTGCCATTATAAATGCCAAAAAAACTTACATTGTTCAAATGAAACATAGTCCTCTGCCTTCTGAATATCCCACCCACCATGATTGGTTCTCAGCCCATCTCCAATCTCTGTCTCATTCTTCCACTTCTGATTCCCTTCTCTACACTTACACCTCCGCCTACCATGGCTTTGCTGCATCTCTCGATCCCGACGAGGTCGAATTGCTAAGCCAATCCGATTCCGTCCTCGGCGTCTACGAGGACTCTGTCTACACCCTCCACACCACTCGAACACCTGAATTCCTCGGCCTCGACTCCAATTTCAACTTATGGGAAGGCCACAACACTCAGGATCTCAACCAGGCGTCCCACGACGTCATCATCGGGGTCCTCGACACCGGCATTTGGCCCGGGTCGAAGAGCTTCGACGACGCGGGAATGCCCGAGATCCCGGCCCGGTGGCGCGGAGAATGCGAATCCGGACCCGATTTCAGCCCTTCCTTGTGCAACAAGAAACTGATCGGAGCCCGGAGCTTCTGGAAAGGGTACCGAATGGCGTCGGGGGGCGGGTACTTGGGAAGAGCCGGGGAAAATGAATCGCCCAAGGATGAGGATGGGCACGGAACTCACACAGCGAGCACGGCTGCGGGGTCCCACGTGGCGAATGCGAGCTTGCTTGGTTATGCAAGCGGCATTGCCCGTGGGATGGCCCCTCAGGCTAGAGTGGCCGCTTATAAGACCTGTTGGCCGACGGGATGCTTCGGGTCCGACATTCTCGCAGGGATGGATCGGGCCCTATCGGACGGTGTGGATGTGCTGTCGCTCTCATTAGGGGGTGGATCCGCGCCGTATCATAGAGATACAATTGCAATTGGAGCGTTTGCTGCAATGGAAAAGGGGGTGTTTGTTTCGTGTTCAGCTGGAAACAGTGGGCCAAACAAGGCCTCTCTTGCCAACGTGGCACCGTGGATCATGACGGTCGGAGCCGGCACTCTAGACCGGGACTTCCCGGCCTACGTCCAGCTCGGGAATGGGAAGCGCTTCGTTGGGGTTTCGCTGTACAGTGGGGAAGGGATGGGGAAACAACCGGTGGGTTTGGTGTACAGCAAAGGAAGCAACAGCTCCAGCAATTTGTGCTTGGTCGGTTCGCTTGAACCGGGGATGGTCAAAGGGAAAGTGGTGGTTTGTGACCGGGGAGTCAACGCCAGAGTGGAGAAAGGTGGGGTTGTGAGACAAGCCGGTGGGGTTGGGATGATTCTGGCGAACACCGCCGCGAGTGGGGAGGAGTTGGTGGCGGACAGCCACTTGTTGCCGGCGGTGGCGGTGGGGAGGAACACCGGCGACTTGATCCGGCAGTATGTGGAGTCGGCGGCGGAGCCCACGGCGGCGCTGAGCTTTGGCGGGACGGTTTTGAACGTGAGGCCGTCGCCGGTGGTGGCGGCGTTTAGTTCAAGAGGACCCAATTTGGTGACGCCCCAAATTCTGAAGCCGGATGTAATTGGGCCTGGGGTTAATATATTGGCGGCTTGGTCTGAGTCCATTGGGCCTACTGGATTGGATACTGACAAGAGAAAAACTCAGTTCAATATTATGTCAGGAACATCTATGTCTTGCCCGCATATAAGTGGGTTAGCAGCATTGCTGAAGGCAGCTCATCCAGAATGGAGTCCAAGTGCCATCAAATCTGCGTTAATGACCACTGCATACACGTTAGACAACACCAATTCATCTCTCAGGGATGCTGCTGGAGGGGAACTTTCCAACCCATGGGCTCATGGATCTGGCCATGTTGATCCCCACAAAGCCCTCTCCCCTGGTCTCGTATACGATATCTCCACCGATGAGTACATTGCCTTCTTGTGCTCCTTGGACTATGGACTTGATCATGTTCAGGCAATTGTGAAGCATTCCAATGTAACCTGCTCCAAAAAGTTTGCTGACCCAGGACAACTTAACTACCCTTCATTCTCAGTTGTGTTTGGGAGCAAGAGAGTTGTTCGATACACTCGTGAAGTCACGAATGTTGGGGCTGCAGCGTCGGTTTATGAAGTGGCTACTACCGCTCCATCGGTCGTAAAAGTGGTGGTGAAACCATCTAAGCTTGTGTTCACTAAAGTTGGGGAGAAGCAGAGGTACACTGTTACATTCGTGGCGAGTAGGGGCGCTGCTCAAACCATGAGATTCGGGTTTGGATCGATTGCGTGGAGCAACGACCAGCACCAAGTTAGAAGCCCAGTGGCATTCGCTTGGACAAGGTTGTGA 2298 54.18 MDSMARFLILSLLLLLLLPCAIINAKKTYIVQMKHSPLPSEYPTHHDWFSAHLQSLSHSSTSDSLLYTYTSAYHGFAASLDPDEVELLSQSDSVLGVYEDSVYTLHTTRTPEFLGLDSNFNLWEGHNTQDLNQASHDVIIGVLDTGIWPGSKSFDDAGMPEIPARWRGECESGPDFSPSLCNKKLIGARSFWKGYRMASGGGYLGRAGENESPKDEDGHGTHTASTAAGSHVANASLLGYASGIARGMAPQARVAAYKTCWPTGCFGSDILAGMDRALSDGVDVLSLSLGGGSAPYHRDTIAIGAFAAMEKGVFVSCSAGNSGPNKASLANVAPWIMTVGAGTLDRDFPAYVQLGNGKRFVGVSLYSGEGMGKQPVGLVYSKGSNSSSNLCLVGSLEPGMVKGKVVVCDRGVNARVEKGGVVRQAGGVGMILANTAASGEELVADSHLLPAVAVGRNTGDLIRQYVESAAEPTAALSFGGTVLNVRPSPVVAAFSSRGPNLVTPQILKPDVIGPGVNILAAWSESIGPTGLDTDKRKTQFNIMSGTSMSCPHISGLAALLKAAHPEWSPSAIKSALMTTAYTLDNTNSSLRDAAGGELSNPWAHGSGHVDPHKALSPGLVYDISTDEYIAFLCSLDYGLDHVQAIVKHSNVTCSKKFADPGQLNYPSFSVVFGSKRVVRYTREVTNVGAAASVYEVATTAPSVVKVVVKPSKLVFTKVGEKQRYTVTFVASRGAAQTMRFGFGSIAWSNDQHQVRSPVAFAWTRL 765
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7816080 7819857 + Sed0019841.1 Sed08g0922 722698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed08g0922 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 758 IPR045051 -
Sed08g0922 765 ProSiteProfiles Serine proteases, subtilase domain profile. 119 615 - -
Sed08g0922 765 CDD Peptidases_S8_3 103 581 IPR034197 -
Sed08g0922 765 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Sed08g0922 765 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Sed08g0922 765 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Sed08g0922 765 Pfam Peptidase inhibitor I9 28 106 IPR010259 -
Sed08g0922 765 Gene3D Peptidase S8/S53 domain 137 628 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed08g0922 765 SUPERFAMILY Protease propeptides/inhibitors 26 105 - -
Sed08g0922 765 MobiDBLite consensus disorder prediction 206 226 - -
Sed08g0922 765 FunFam subtilisin-like protease SBT1.5 345 483 - -
Sed08g0922 765 FunFam Subtilisin-like protease SBT1.5 137 355 - -
Sed08g0922 765 Pfam Subtilase family 136 585 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed08g0922 765 Pfam Fibronectin type-III domain 662 759 IPR041469 -
Sed08g0922 765 Gene3D - 345 483 - -
Sed08g0922 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 106 IPR037045 -
Sed08g0922 765 Pfam PA domain 387 461 IPR003137 -
Sed08g0922 765 Gene3D - 632 762 - -
Sed08g0922 765 SUPERFAMILY Subtilisin-like 105 619 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed08g0922 765 CDD PA_subtilisin_like 351 474 - -
Sed08g0922 765 FunFam Subtilisin-like protease SBT1.5 632 763 - -
Sed08g0922 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Sed08g0922 765 FunFam Subtilisin-like protease SBT1.9 20 106 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g2379 Sed-Chr4:37174613 Sed08g0922 Sed-Chr8:7816080 1.10E-204 dispersed
Sed06g0193 Sed-Chr6:1416417 Sed08g0922 Sed-Chr8:7816080 2.10E-190 dispersed
Sed08g0922 Sed-Chr8:7816080 Sed10g0690 Sed-Chr10:4821375 1.20E-227 dispersed
Sed08g0922 Sed-Chr8:7816080 Sed08g0923 Sed-Chr8:7816080 0.00E+00 tandem
Sed12g1704 Sed-Chr12:28243348 Sed08g0922 Sed-Chr8:7816080 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed08g0922 - - - 0.0