Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed08g1181 | ATGGAGCATTTACTCATCTCACTCCTTGTCCTCTTCCTCTCCTTCCTCTCCATCACTCTGTTCGTCCTGTTCTACAAGCACAAGTCGTTATTCTCGTATCCCAACGTCCCTCCCGGCACCATCGGCATTCCCATCCTGGGCGAGAGCCTGGAGTTCCTATCCACGGGCTGGAAAGGCGAGCCCGAGAAGTTCATCTTCGACCGCATCACCAAGTTCAAGTCCGAAATCTTCAAGACCTCCATCGTGGGGGTTCCGGCGGCTGTGTTGTGCGGCCCTGTGTGCAACAAGTTCCTCTTCTCCAACGAGGACAAACTCGTCACCGCCTGGTGGCCGGACTCCGTCAACAAGATCTTCCCCTCCTCCACCCAGACCAACTCCAAAGAAGAGGCTAAGAAACTCAAGAAACTCCTCCCCCAGTTCCTTAAGCCCGAAGCCCTTCAGCGGTATATCGGAATCATGGACCAACTCGCTCAACGCCATTTCGCTCACTCCTGGGAGAATAGAGAAGAGGTCCTCATGTTTCCTCTCGCCAAAACCTTCACCTTCGCGCTTGCGTGCCGCCTGTTCGTGAGCGTCGAGGATCCAGCGCACGTGGAGAGGCTATCAGGACCGTTCCAGCACATTGCAGCAGGAATCATTTCCATGCCCATCAATCTACCCGGAACGCCCTTCAACCGTGCGATTAAGGCCTCCAACTTCATCAGAAAGGAGCTGCTGAAGATCGTGCGGCAGAGGAACGCGGATCTGGCCGAAGGAAAGGCCTCTCCCACGCAGGACATTCTGTCGCACATGCTTCTCACCTGCGATGAAAGCGGGCACCACATGAAGGAGTCCGACATCGCCGATAAGATCCTCGGGTTGCTGATCGGAGGCCATGACACTGCCAGTGCCGCCTGTACCTTCATCGCCAAGTTCCTCGCTGAGCTTCCTCACATCTACGATGGCGTCTACAAAGAGCAAATGGAAATAGCAAAGGCAAAAGCCCCAGGGGAGCTATTGAACTGGGAAGACATTCAGAAGATGAAATATTCATGGAATGTGGCCTGTGAGGTTCTAAGACTTGCTTCCCCACTCCAAGGTGCCTTTAGAGAAGCCTTAACCGATTTCGTCTTTAATGGCTTCTACATTCCCAAGGGCTGGAAGTTATATTGGAGCTCAAACTCAACACACAAAAACGGGGAGTTCTTCCCAGAGCCATACAAATTTGACCCGTCGAGATTCGAAGGGAAGGGGCCAGCGCCGTATACATTCGTGCCGTTCGGGGGCGGGCCAAGAATGTGCCCCGGAAAAGAGTACGCGAGGCTGGAGATTCTGGTTTTCATCCACAATTTGGTGAAGAGATTCAAATGGGAAAAGCTTCTTGAGAAAGAGATGATCGTTTGCGATCCAATGCCAATCCCTCAAAAAGGTCTCCCCATTCGCCTTTTTCCCCATAAATCTCCCTCATCTGTTTAA | 1455 | 52.71 | MEHLLISLLVLFLSFLSITLFVLFYKHKSLFSYPNVPPGTIGIPILGESLEFLSTGWKGEPEKFIFDRITKFKSEIFKTSIVGVPAAVLCGPVCNKFLFSNEDKLVTAWWPDSVNKIFPSSTQTNSKEEAKKLKKLLPQFLKPEALQRYIGIMDQLAQRHFAHSWENREEVLMFPLAKTFTFALACRLFVSVEDPAHVERLSGPFQHIAAGIISMPINLPGTPFNRAIKASNFIRKELLKIVRQRNADLAEGKASPTQDILSHMLLTCDESGHHMKESDIADKILGLLIGGHDTASAACTFIAKFLAELPHIYDGVYKEQMEIAKAKAPGELLNWEDIQKMKYSWNVACEVLRLASPLQGAFREALTDFVFNGFYIPKGWKLYWSSNSTHKNGEFFPEPYKFDPSRFEGKGPAPYTFVPFGGGPRMCPGKEYARLEILVFIHNLVKRFKWEKLLEKEMIVCDPMPIPQKGLPIRLFPHKSPSSV | 484 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 24461141 | 24465427 | + | Sed0025357.1 | Sed08g1181 | 722957 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed08g1181 | 484 | Gene3D | Cytochrome P450 | 27 | 477 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed08g1181 | 484 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 420 | 429 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
Sed08g1181 | 484 | PANTHER | CYTOCHROME P450 26 | 35 | 458 | - | GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
Sed08g1181 | 484 | PRINTS | E-class P450 group I signature | 385 | 409 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed08g1181 | 484 | PRINTS | E-class P450 group I signature | 279 | 296 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed08g1181 | 484 | PRINTS | E-class P450 group I signature | 417 | 427 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed08g1181 | 484 | PRINTS | E-class P450 group I signature | 427 | 450 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed08g1181 | 484 | FunFam | Taxadiene 5-alpha hydroxylase | 27 | 478 | - | - | |
Sed08g1181 | 484 | CDD | CYP90-like | 68 | 477 | - | - | |
Sed08g1181 | 484 | Pfam | Cytochrome P450 | 37 | 460 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed08g1181 | 484 | PRINTS | P450 superfamily signature | 290 | 307 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed08g1181 | 484 | PRINTS | P450 superfamily signature | 418 | 427 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed08g1181 | 484 | PRINTS | P450 superfamily signature | 427 | 438 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed08g1181 | 484 | SUPERFAMILY | Cytochrome P450 | 30 | 477 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed05g1879 | Sed-Chr5:32195073 | Sed08g1181 | Sed-Chr8:24461141 | 2.20E-76 | dispersed | |
Sed07g2699 | Sed-Chr7:42282257 | Sed08g1181 | Sed-Chr8:24461141 | 2.00E-83 | dispersed | |
Sed08g0425 | Sed-Chr8:2604308 | Sed08g1181 | Sed-Chr8:24461141 | 5.10E-182 | dispersed | |
Sed08g1181 | Sed-Chr8:24461141 | Sed13g1742 | Sed-Chr13:22400999 | 1.50E-66 | dispersed | |
Sed08g1181 | Sed-Chr8:24461141 | Sed04g3201 | Sed-Chr4:42674509 | 8.90E-99 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed08g1181 | K20667 | - | csv:101206033 | 813.913 |