Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed08g1455 ATGGGAAGGCGATCCACATGGGTTGCTCTTCTCGTCCTCTCTCTTGTTCAGATTGTTTCTTCCACTCTTTCTGTTCATCTATTCGATCTTCAGAATTATAGAGTTTCTTCCATAAAGAGTACTCCGAAGCAGGATTTGAACAACGCCCATGAGGTACATTGCTCGAGAGAAAGAAGTAGGGCGGCATGGAAAATAATTGAGGAGTATCTAATGCCCTTCGTGGATAAAAGGAAATACAAGATTTCGACTGAGTGTAGGCTTCACCCGGATAATGATATGTTTAGAGATCAAGAACAGCACAAGAAGCATCTAGATTTCAATGACTGGAAGTGTGGATATTGTAGAAAACGATTCTATGAAGAGAAGAATCTCGACCAGCATTTTGTCAACAGGCACTATAATTTGCTCAATGTGAGTCGAAGCAAGTGCTTAGCAGATCTTTGTGGTGCATTGCACTGTGACCATGTAATCAATACGGTATCACAGAAAAGTAAATGCAATCCTGCTGCTGCTGCAAGAAATAAACACATGTGTGAGGCTCTTGCTGACAGTTGTTTTCCCATCGATGCGGGTGCTTCGGCCAGCCATCTTCACGAGTTCTTCTTGCGCCAGTTTTGTGATGGACACACTTGTAGTGGAAAGCTAAAACCTTTCTCCAGAGGTCAACAGGTAAGCAATTTCATTTTATGTATATATAAAGCTCCTTTCGATCAATTTCTTATGGTATACGATGACATTAGGCTGAGCAATATTTAA 756 41.27 MGRRSTWVALLVLSLVQIVSSTLSVHLFDLQNYRVSSIKSTPKQDLNNAHEVHCSRERSRAAWKIIEEYLMPFVDKRKYKISTECRLHPDNDMFRDQEQHKKHLDFNDWKCGYCRKRFYEEKNLDQHFVNRHYNLLNVSRSKCLADLCGALHCDHVINTVSQKSKCNPAAAARNKHMCEALADSCFPIDAGASASHLHEFFLRQFCDGHTCSGKLKPFSRGQQVSNFILCIYKAPFDQFLMVYDDIRLSNI 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 29134933 29140183 + Sed0001198.2 Sed08g1455 723231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed08g1455 251 PANTHER ZINC FINGER PROTEIN-RELATED 15 235 - -
Sed08g1455 251 ProSiteProfiles Zinc finger C2H2 type domain profile. 109 132 IPR013087 -
Sed08g1455 251 ProSitePatterns Zinc finger C2H2 type domain signature. 111 132 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed08g1454 Sed-Chr8:29134933 Sed08g1455 Sed-Chr8:29134933 1.30E-131 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
39349 None None None None Sed TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed08g1455 - - - 0.0