Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed08g1459 ATGCCAAGCGTGGCTGTGAAGCTCTACAGCGTGTTCTTCAAGTTTCTCTTGAAGCATCGATTGCAGAATCTGATCCAAGCTCCACTTGACAAATCCAGCCCTTTCGGAGTCACATCCCGACCCGACGAAACCGTTGCTTCCGCCAATCCTCTCTTCACCGACGGCGTTGCTACCAAAGATATCCACATCGATCCCTTCACATCTCTCAGCATTCGGATCTTCCTCCCCGAATCCGCTCTTACCCCGCCCGAACCCGACTCCAAACCCTCCAGGCCTAAACCTAAACCTAAACGACCCAATCAAGATCTCAATGGTTCACACCATCATTCTCCCCGGAGAAGTAGCTACGGCCCTTCCGTGGAGCTTCGGACCAGTAGATTTGGGGGTTTCAGTAATGAAATGGAGGGTTTGAATTTGATTCATGGCCCTGTATCCGGTGGTGGTTACCGAGGCTATGCGCCGGCCACGAAAAACAGTCGGAGGTTGCCGGTGCTGTTGCAGTTTCACGGCGGGGGGTGGGTCAGTGGGAGCAATGATTCGGCCGCGAATGATTTCTTTTGCCGGAGGATTGCTAGATTGTGTGATGTTATCGTTGTGGCTGTTGGGTATCGGCTTGCGCCGGAGAATCGGTTTCCGGCTGCGTTTGAGGATGGGTTGAAGGTGTTGAATTGGCTGGGGAAGCAGGCCAATTTGGCTGAGTGTAGTAAGTCTATGGGGCATTCGAAAGGCATTGGCAATGAGTTTAAGAAATCGGATCATCATCATAAGCATATTGTTGATACATTTGGGGCATCAATGGTGGAACCTTGGTTGGCTGCCCATGGAGACCCAACAAGATGTGTACTTCTTGGGGTTAGTTGTGGAGCAAATGTTGCAGATTACGTCGCTCGAAAGGCAGTGGAGGCTGGTAAGCTCTTGGACCCTGTCAAGGTTGTTGCGCAGGTTCTCCTGTATCCGTTCTTTATCGGGAGTGTTCCCACACATTCTGAACTAAAGTTGGCGAATTCCTACTTTTACGATAAAGCTATGTGCGTTCTCGCTTGGAAACTCTTCCTACCGGAGGAAGAGTTTAGTCTTGATCATCCAGCTGCAAACCCCCTTGTTTCTGGTAAGGAAGGCCTACCTTTAAAGCTCATGCCACCAACGCTGACAGTGGTGGCTGAACTCGACTGGATGAGAGACCGAGCCATAGCTTACTCCGAAGAACTCCGAAAAGTAAATGTCGATGCGCCCGTTCTCGACTATAAGGATTCTGTGCATGAATTTGCTACCCTCGACATTCTTCTTAAGACACCTCAAGCCCAAGCTTGTGCAGAGGACATTGCCATCTGGGTCAAAAAATATATTTCACTACGAGGCCATGAGTTCTCTTATTGA 1377 49.96 MPSVAVKLYSVFFKFLLKHRLQNLIQAPLDKSSPFGVTSRPDETVASANPLFTDGVATKDIHIDPFTSLSIRIFLPESALTPPEPDSKPSRPKPKPKRPNQDLNGSHHHSPRRSSYGPSVELRTSRFGGFSNEMEGLNLIHGPVSGGGYRGYAPATKNSRRLPVLLQFHGGGWVSGSNDSAANDFFCRRIARLCDVIVVAVGYRLAPENRFPAAFEDGLKVLNWLGKQANLAECSKSMGHSKGIGNEFKKSDHHHKHIVDTFGASMVEPWLAAHGDPTRCVLLGVSCGANVADYVARKAVEAGKLLDPVKVVAQVLLYPFFIGSVPTHSELKLANSYFYDKAMCVLAWKLFLPEEEFSLDHPAANPLVSGKEGLPLKLMPPTLTVVAELDWMRDRAIAYSEELRKVNVDAPVLDYKDSVHEFATLDILLKTPQAQACAEDIAIWVKKYISLRGHEFSY 458
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 29158285 29161781 - Sed0027789.1 Sed08g1459 723235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed08g1459 458 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 165 181 IPR002168 GO:0016787(InterPro)
Sed08g1459 458 MobiDBLite consensus disorder prediction 88 109 - -
Sed08g1459 458 MobiDBLite consensus disorder prediction 78 120 - -
Sed08g1459 458 PANTHER ARYLACETAMIDE DEACETYLASE 47 427 IPR050466 -
Sed08g1459 458 Gene3D alpha/beta hydrolase 131 453 IPR029058 -
Sed08g1459 458 Pfam alpha/beta hydrolase fold 165 423 IPR013094 GO:0016787(InterPro)
Sed08g1459 458 SUPERFAMILY alpha/beta-Hydrolases 149 449 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed08g1459 Sed-Chr8:29158285 Sed08g1815 Sed-Chr8:32915325 6.20E-25 dispersed
Sed06g0469 Sed-Chr6:4109690 Sed08g1459 Sed-Chr8:29158285 4.10E-226 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed08g1459 - - - 0.0