Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed08g1486 ATGGATATCATAATCTCCCTCTTCCCCATCTTCATTTTCATCTTCCTCCTCTTCAAATTCCGGCCACCCGCCACCACGTTCCCCGGCCAATCTTCGCCGCCGACCTACCCTCTCATCGGCTGCCTTCTCTCCTTCTACAACAACCGCAACCGCCTGTTGGATTGGTACACCGAGCTCTTGTCGGACTCCGACACCGGCACCATCGTCATCAGCCGCCTCGGCTGCCGGAGGACGGTGGTCACAGCAAACCCGCTTAACGTTGAGTACATTTTGACGACCCATTTCGTTAATTTCCCTAAAGGGAAGCCTTTCACTGAGATCTTGGGCGACTTTCTTGGCTATGGCATTTTCAACGTTGACGGCGAGCTATGGCAGACGCAGCGGAAGCTGGCTAGCCATGAGTTTACCGCCAACTCCCTTCGAGAATTCGTGGTTAAGACGTTGGCGTCTGAAGTCGAGAACCGATTGTTGCCTGCTATAGAAAGATCAGTGCGAGATAATAGAATGGTAGATTTGCAGGAGTTACTACGAGGATTTGCATTCAGTGTAATATGCAAGGTTGTATTAGGTAGTGAAGAAGAGGCCATTTCGGGGCTCGAGAAGAGCTTCGACGTAGCGTCGGAGGTGAGCGCTGGACGGGCAAAGGAGCCGGTTTACATGATGTGGAAGATGAAGAGGTGGTTCGGCGTCGGATCCGAGCGGCTGCTGAAGATGTCGGTTGCGGAGGTTCATAGGAAGGTGATGAACATAATTGACAAGAAAAGGAAGAAGAAGATCCAGAGTTTCCATGACAGCCAAGATCTCTTGTCCAGGTTGATCAGTGTCGGTTATGATGATGAGGTGATACGAGACATGGCTATAAGCTTCATCATGGCGGGGCGAGACACGACATCGGCCGCTATGACATGGCTCTTTTGGCTACTCTCCCATCATCCCGACATCGAGAATCGATTGATAGAAGAAATAGACTTCGAAACAACACTAACATTTCACAAGAAATTCAATTACAAATCTCTCAAGGAGCTCACATTTCTCAAGGCATTCCCTTGGGACTCCAAGCACGCCATTGTTGACGACTACTTACCCGACGGTACTCCAGTCCAAGCCGGAGATAGAGTGACGTATTTCCCGTACGGAATGGGGAGAATGGAAGCTCTTTGGGGGAAGGACCGCTTCGAGTTCAAGCCGAGCCGATGGCTGCTCGAACCAGACAGCCATGGCCAGAAAGGTGAGGTGAAGCTGGTTAGTCCATACAAGTTTCCAATTTTTCAGGCGGGGCCAAGGGTGTGTTTGGGAAAAGAGATGGCTTTCATTCAAATGAAGTATGTTGTAGCCTCAATTCTCAGCCACTTTAGAATCAAACCCATCGCCGCCGACCAACCTGTGTTCGTCCCGCTGTTGACGGCGCACATGGTCGGCGGCTTAAAGGTTCTGTTTCAGAGGAGAGAGCCTCAAAACAAGCAAAATTCCCAATTTAAACAATCAGAAGAGTCAAAGTCAACTATGTCAACACTGAACTGA 1521 49.97 MDIIISLFPIFIFIFLLFKFRPPATTFPGQSSPPTYPLIGCLLSFYNNRNRLLDWYTELLSDSDTGTIVISRLGCRRTVVTANPLNVEYILTTHFVNFPKGKPFTEILGDFLGYGIFNVDGELWQTQRKLASHEFTANSLREFVVKTLASEVENRLLPAIERSVRDNRMVDLQELLRGFAFSVICKVVLGSEEEAISGLEKSFDVASEVSAGRAKEPVYMMWKMKRWFGVGSERLLKMSVAEVHRKVMNIIDKKRKKKIQSFHDSQDLLSRLISVGYDDEVIRDMAISFIMAGRDTTSAAMTWLFWLLSHHPDIENRLIEEIDFETTLTFHKKFNYKSLKELTFLKAFPWDSKHAIVDDYLPDGTPVQAGDRVTYFPYGMGRMEALWGKDRFEFKPSRWLLEPDSHGQKGEVKLVSPYKFPIFQAGPRVCLGKEMAFIQMKYVVASILSHFRIKPIAADQPVFVPLLTAHMVGGLKVLFQRREPQNKQNSQFKQSEESKSTMSTLN 506
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 29356077 29360047 - Sed0019708.1 Sed08g1486 723262
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed08g1486 506 SUPERFAMILY Cytochrome P450 32 482 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g1486 506 PRINTS E-class P450 group I signature 301 327 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g1486 506 PRINTS E-class P450 group I signature 430 453 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g1486 506 PRINTS E-class P450 group I signature 420 430 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g1486 506 PRINTS E-class P450 group I signature 281 298 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g1486 506 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g1486 506 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g1486 506 CDD CYP86A 67 475 - -
Sed08g1486 506 Gene3D Cytochrome P450 25 493 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g1486 506 MobiDBLite consensus disorder prediction 483 506 - -
Sed08g1486 506 Pfam Cytochrome P450 32 461 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g1486 506 PANTHER CYTOCHROME P450 17 475 - -
Sed08g1486 506 PRINTS P450 superfamily signature 430 441 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g1486 506 PRINTS P450 superfamily signature 421 430 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g1486 506 PRINTS P450 superfamily signature 292 309 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed08g0036 Sed-Chr8:169980 Sed08g1486 Sed-Chr8:29356077 2.00E-154 dispersed
Sed08g1486 Sed-Chr8:29356077 Sed09g0050 Sed-Chr9:409158 5.70E-72 dispersed
Sed08g1486 Sed-Chr8:29356077 Sed12g2502 Sed-Chr12:34536214 1.20E-154 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed08g1486 K20665 - csv:101207598 728.398