Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed08g1765 ATGTCGAAGCCACCGTCTTCATCTGACCGCTCTTTCATCTTCATCTTCCTCCTTTTCATCTCCTCTTCCGCCGCCGCCCTCCCCGACGCGGATCAGCCGGTTCTCGCCAACGCTACTCTCCAGTCCAACAACGTCTCCATTCCGAGGAATAAGGAGGGCAGCTTTGCGGATATCATCGATCGTGCTCTGGAGAACGAATTCAAGGAGAATGATCAGCCTGAAGCAATTGACGCAGGTGGCTTCAACAACAGTGTAACAGAGCAGCAGGCAGTTCTGGAGACTGTGGCAAGGGTAAAGACAAAGAAAAACGACACGAAAGAGGAAAAGTTTCAGCTTCAAAATGTTTTCAATTTGGACAATGATAATAGAGCTGAAGATACTCCTACATTGATTGATCGCAAGGACAATGTCTTTATCATATCCAACTTCAAGTCTAAATATCCAGTGCTGCAACTAGACTTGAGATTGATCTCAGATTTGGTTATCGTTATTGTCTCTGCAACTTGTGGTGGAATTGCCTTCGCCTGTGCTGGACAACCAGTTATAACTGGATATCTTCTAGCAGGATCTATTATTGGGCCTGGAGGATTTAACTTCGTCAGTGAAATGGTGCAAGTTGAAACTGTAGCTCAATTTGGTGTAATTTTTCTTCTTTTTGCACTGGGGTTGGAATTTTCAACAACTAAGCTTCGAGTTGTTCGAGCTGTTGCTGTTCTTGGTGGCCTGCTCCAAATTTTCCTATTTATTTGCCTAAGTGGGATCACAGCCTCGTCATGTGGTGGAAGTGCTTCTGAAGGAGTTTTTGTCGGAGCATTCCTATCAATGTCCTCAACAGCAGTGGTGCTGAAGTTTTTGATGGAAAAGAATTCGACAAATGCTCTTCATGGACAAGTCACGATAGGCACCCTTATCTTGCAGGACTGTGCTGTTGGGTTACTATTTGCTTTGCTTCCAGTACTGGGTGGGAACTCTGGTATTCTTCAAGGAGTGATATCCATGAGTAAAGTGTTGGTGACCTTGATCACTTTTTTGGTTGTTTTGTCAATTTTATCCCGTACATGCATTCCTTGGCTTTTAAAGTTGATGATTAGTCTATCATCACAGACCAATGAACTCTATCAATTAGCCTCAGTGGCATTCTGCTTGCTTGTAGCGTGGTGTAGTGATAAGTTAGGGCTAAGTCTAGAATTGGGTTCATTTGCTGCTGGAGTGATGATATCAACAACTGATCTTGCTCAACATACACTTGAACAAATAGAGCCTATAAGAAACTTCTTTGCGGCTCTTTTTCTTGCCAGCATTGGGATGCTGATCCACGTTCAGTTTTTGTGGAACCATGTTGATATATTACTGGCAGCTGTTATACTGGTGATAATTGTAAAAACAATTGTAATTAGCACTGTGGTGAAGGGATTTGGGTATAACAACAGGACGTCACTTCTGGTTGGAATGTCTCTGGCTCAGATAGGGGAATTTGCTTTTGTTCTTCTCAGCCGTGCTTCTAATCTTCATCTAGTAGAGGGAAAACTGTATCTGTTGCTTATTGGGACCACAGCTCTCAGTCTGGTAACAACTCCTCTTCTTTTCAAGCTGATACCTGCTGTCGTGCATTTAGGCGTACTATTGCGGTGGTTCTCTCCCGACAGTCTCGTTGAGATTGGATTTAAAGGAGACATCATCCGCTCAGACAGTGTAAAGCAGCGTGTTATGTTGGTAGTCCAGGGATCTCATGATTCATGA 1740 43.56 MSKPPSSSDRSFIFIFLLFISSSAAALPDADQPVLANATLQSNNVSIPRNKEGSFADIIDRALENEFKENDQPEAIDAGGFNNSVTEQQAVLETVARVKTKKNDTKEEKFQLQNVFNLDNDNRAEDTPTLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVIVIVSATCGGIAFACAGQPVITGYLLAGSIIGPGGFNFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAVLGGLLQIFLFICLSGITASSCGGSASEGVFVGAFLSMSSTAVVLKFLMEKNSTNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGILQGVISMSKVLVTLITFLVVLSILSRTCIPWLLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQIEPIRNFFAALFLASIGMLIHVQFLWNHVDILLAAVILVIIVKTIVISTVVKGFGYNNRTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLIGTTALSLVTTPLLFKLIPAVVHLGVLLRWFSPDSLVEIGFKGDIIRSDSVKQRVMLVVQGSHDS 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 32503088 32513941 - Sed0005637.1 Sed08g1765 723541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed08g1765 579 Gene3D - 154 537 IPR038770 -
Sed08g1765 579 Pfam Sodium/hydrogen exchanger family 164 530 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Sed08g1765 579 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 39 562 IPR045158 GO:0015386(InterPro)|GO:0071805(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1090 Sed-Chr7:8012985 Sed08g1765 Sed-Chr8:32503088 7.90E-187 dispersed
Sed08g1765 Sed-Chr8:32503088 Sed12g1770 Sed-Chr12:28822994 9.00E-247 dispersed
Sed08g1765 Sed-Chr8:32503088 Sed02g1642 Sed-Chr2:51736712 2.40E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed08g1765 K26735 - csv:101217282 984.556