Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed08g1768 ATGGCTTCTATCTTCCAGGATCTCTTCCAGATGCTCTGTTTTCAACCTTTCCGGGACAAAACTCGCCTTCTCTCCGAGTCCATTTTACAGACCGTTTCCGAATCGATGAGCAATTCGATCTGCGGTGTTTCTGAAGTAGAGCTCTGTCGAAACGATTCGGTTGCGTTTGATTTGAAATTACTCGCAATCGCCTCGATTCTCGCCTCCGGCGTCCTCGGAATCGCCGTTCCCCTGTTCGGCAGCCGCCGCCGGTTTCTCCGAACCGACGGCAGCCTGTTCGCGGCAGCGAAGGCGTTCTCCGCCGGCGTGATTCTCGCAACGGCGTTCGTCCACATGCTCCCCGACGGAACCGACGCTCTGTCCGATCCGTGCTTGCCGGAATTTCCATGGTCCAGATTTCCCTTCTCTGGATTCTTTGCGATGATGGCGTCGCTGTTTACGCTCCTTGTCGAGTTCGTCGGAACTTGGTATTACGAACGGGAACAGAGTCGGGTGGGGTCGGCTGTGGATTTCGGGGCTGAGTCCGGTGTTGACCCGAATGAGGAGGGCGACGGCGGGATGCACATCGTCGGAATCCACGCTCACGCCGCCGAGCACCGGCATAGTCACCGGCAGGGAAATGGGGCATGTGATGGGCACGTGACGCACCATGATCATGACCTCGCCGGCGACGATGACGAAAGCGGCGTACGACATGTCGTTGTTTCCCAGATTTTGGAGCTTGGAATAGTGTCACATTCAGTGATCATTGGGATTTCACTAGGAGTGTCCCACAGCCCATGCACCATAAGACCCTTAATTGCAGCCCTATCCTTCCATCAGTTATTTGAAGGCTTTGCCCTTGGAGGCTGCATCTCTCAGGCTCACTTCAACTCCCTCTCCACCTCCATCATGGCCGCCTTCTTCGCCCTCACCAACCCCATCGGTATCGCCATCGGGGCTGCCATCTCCTCCACCTACAACCCAAACAGCACCGGGGCGTTGGTTGCTGAAGGCATTTTGGACTCTCTCTCCGCGGGAATTCTTGTGTATATGGCTTTGGTTGATCTGATCGCAGCTGACTTTCTTAGCAAGAGGATGAGATGCAATTTTAGACTTCAAATTGTTTCGTATTGTACCCTTTTCCTCGGCGCGGGATTGATGTCTTCGCTCGCGCTTTGGGCTTGA 1167 54.93 MASIFQDLFQMLCFQPFRDKTRLLSESILQTVSESMSNSICGVSEVELCRNDSVAFDLKLLAIASILASGVLGIAVPLFGSRRRFLRTDGSLFAAAKAFSAGVILATAFVHMLPDGTDALSDPCLPEFPWSRFPFSGFFAMMASLFTLLVEFVGTWYYEREQSRVGSAVDFGAESGVDPNEEGDGGMHIVGIHAHAAEHRHSHRQGNGACDGHVTHHDHDLAGDDDESGVRHVVVSQILELGIVSHSVIIGISLGVSHSPCTIRPLIAALSFHQLFEGFALGGCISQAHFNSLSTSIMAAFFALTNPIGIAIGAAISSTYNPNSTGALVAEGILDSLSAGILVYMALVDLIAADFLSKRMRCNFRLQIVSYCTLFLGAGLMSSLALWA 388
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 32525130 32529180 - Sed0023651.1 Sed08g1768 723544
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed08g1768 388 PANTHER ZINC/IRON TRANSPORTER 55 387 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Sed08g1768 388 NCBIfam ZIP zinc/iron transport family 41 388 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Sed08g1768 388 Pfam ZIP Zinc transporter 57 385 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g1122 Sed-Chr6:31962100 Sed08g1768 Sed-Chr8:32525130 2.60E-76 dispersed
Sed08g1768 Sed-Chr8:32525130 Sed11g0884 Sed-Chr11:21321665 1.00E-145 dispersed
Sed11g0883 Sed-Chr11:21321665 Sed08g1768 Sed-Chr8:32525130 1.00E-156 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed08g1768 K14709 - csv:101218224 585.489