Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed08g1783 ATGTATCAATCTGAAGATGGGATTCCGTTGAACACCACGGCCGTCGCCATCGACAAGGATAAGAACAGCCAGCACGCCGTACGCTGGGCTATCGATCATCTCGTCATAAGTAATCCGCTTATTATCCTTATCCATGTCAGGCATAAACATTATCAACATCGTAGGTACCCTCTATCTTTTCGTTCTCGTATGCATTGTTGCCTCGTTGGTTTAGTTTCTGATTGTTTTTTGTTTTTTTTATTAGAGGGTGCGAGCGATTCTGAAAATGGTGAAACTGATGCGCAGCAGCTGTTTGTTCCCTATCGTGGATATTGTGCGCGGAAAGGGGTTCATCTGAAGGAGGTCATTCTTGACGATACCGATATTCCCAAAGCACTTGTTGACTATGTTCACAAGAATTGCATCAACAATTTTGTTGTCGGAGCTTCAACAAGGAGTGCTCTAGCTAGGAAATTTAAAGGTCATGATGTCTCAACCAGCATAATAAAAATTGCCCCGGACTTTTGTTCTGTGTATGTAATATCAAAAGGGAAGATAATATCTGCCAGGGCAGCTCTTCGGCCAGTGGCTAATACTGCTGTGCCACCAAAACAACCATCGCCGCGTGGAATTCAACCAGATGGCAGTAATGAACAAGAAAATGGAGCCAAAAGGCCACCAGCAAGGGAAGGATGGAAAAGTGCAGGTTCAGATAGGATGCTTTGTGAAAGGAATGGTACAAAACCTGCAAAAGCGTTGACTCGTGAGAGGCCTAAAACTTCCCCAAATAATATATCGTTGGAAAATCTCGAGGACCCAAATCATGGGTCTAGGTCTTCATTCAGCCGCGATTCGATCTCTGATGACAATATGTTGACTGCACATATGGCTTTTGGTTCAATGGATCTGAGTGATCAAAATTTAGATTTCAGTAATTTGTCAATGGATTCTGCTTCTGCACAATCGACACGAGAACTAGAGGCTGAGATGAAAAGATTGAAGCTGGAATTAAAGCAAACCATGGATATGTATAGCTCAGCCTGCAAAGAGGCGATCTCAGCCAAGAACAAGGCTAGAGAACTTAGTCAGTGGAAGCAAGATGAGGCACGTAAGTTTGAGGAAGTCAGACTAGCTGAAGAGGCTGCTCTCGCTATTGCTGAGATGGAGAAAGCCAAGTGCAAAGCTGCCATTGAAGCAGCAGAGGCAGCACAAAAGCTAGCTGAAAGAGAAGCCCAAAGAAGAAAACAGGCTGAAATGAAGGCTAAAAAAGAGGCAGAAGAGAAAAAACGAGCATTGAGTGCTTTAGCTCATAATGATGTTCGATATCGAAAATATACCATAGAAGAGATAGAGGAATCTACCGAAAAGTTCTCTGATAAGTTGAAGATTGGAGAAGGTGGGTATGGTCCTGTTTATGGAGGCAAACTTGATCATACGGCTGTTGCAATTAAAGTTTTAAGACCGGACGCTGCTCAAGGACGAAAGCAATTCCAGCAAGAGGTGGAGGTCCTTTGTTGTATCAGACATCCAAACATGGTGCTCCTTCTTGGGGCATGCCCCGAATATGGTTGCTTGGTATATGAATACATGCATAATGGGAGCTTAGAAGACAGACTTTTCCGGAGAGGGAATACTCCTCCATTATCTTGGAGACGACGATTCAAAATATCTGCTGAAATTGCAACTGCGCTCCTTTTTCTTCACCAAGCGAAGCCAGAACCACTTGTGCATAGGGACCTTAAACCAGCTAACATTCTCTTGGACCGCAACTACGTGAGCAAAATCAGTGACGTTGGCTTGGCCCGGTTAGTTCCACCTTCTGTAGCTGATCAAGTCACTCAGTATCACATGACTTCAGCAGCTGGTACATTTTGTTACATTGATCCCGAGTACCAACAAACAGGAAAGTTAACAACAAAATCAGATATTTACTCGTTTGGAATAATGTTACTTCAAATTATTACTGCCAAGCCTCCAATGGGTCTGGCTCACCATGTGCAAAGGGCCATTGAGAAAGAGAGGTTCAATGAGATGTTGGATCCTACAATTTCAGATTGTCCATTGGAGGAGGCTATAAATTTTGCAAAACTGGCATTGAAGTGCGCTGAACTGAGGAAGAGAGATAGACCAGATATTGGAACGGTTATAGTTCCAGAGCTCAACAGGTTAAGAGATATTGGGAGGAGTTCTGACAAACATGAGGGTCGGAATCCCTTTCCACGCTCTGCCGCCTCAAGTTCCAGTTCCGGTATGAGGTCGCAGTCATCAAATGAGGATTCGAGAACTAATTATTATACAGTTGAAGGAAGTTAG 2292 43.63 MYQSEDGIPLNTTAVAIDKDKNSQHAVRWAIDHLVISNPLIILIHVRHKHYQHRRYPLSFRSRMHCCLVGLVSDCFLFFLLEGASDSENGETDAQQLFVPYRGYCARKGVHLKEVILDDTDIPKALVDYVHKNCINNFVVGASTRSALARKFKGHDVSTSIIKIAPDFCSVYVISKGKIISARAALRPVANTAVPPKQPSPRGIQPDGSNEQENGAKRPPAREGWKSAGSDRMLCERNGTKPAKALTRERPKTSPNNISLENLEDPNHGSRSSFSRDSISDDNMLTAHMAFGSMDLSDQNLDFSNLSMDSASAQSTRELEAEMKRLKLELKQTMDMYSSACKEAISAKNKARELSQWKQDEARKFEEVRLAEEAALAIAEMEKAKCKAAIEAAEAAQKLAEREAQRRKQAEMKAKKEAEEKKRALSALAHNDVRYRKYTIEEIEESTEKFSDKLKIGEGGYGPVYGGKLDHTAVAIKVLRPDAAQGRKQFQQEVEVLCCIRHPNMVLLLGACPEYGCLVYEYMHNGSLEDRLFRRGNTPPLSWRRRFKISAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADQVTQYHMTSAAGTFCYIDPEYQQTGKLTTKSDIYSFGIMLLQIITAKPPMGLAHHVQRAIEKERFNEMLDPTISDCPLEEAINFAKLALKCAELRKRDRPDIGTVIVPELNRLRDIGRSSDKHEGRNPFPRSAASSSSSGMRSQSSNEDSRTNYYTVEGS 763
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 32600125 32604960 - Sed0005280.4 Sed08g1783 723559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed08g1783 763 Coils Coil 316 336 - -
Sed08g1783 763 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 422 522 - -
Sed08g1783 763 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 14 174 - -
Sed08g1783 763 CDD STK_N 12 177 - -
Sed08g1783 763 Gene3D Phosphorylase Kinase; domain 1 415 522 - -
Sed08g1783 763 CDD STKc_IRAK 456 716 - -
Sed08g1783 763 MobiDBLite consensus disorder prediction 733 763 - -
Sed08g1783 763 Gene3D HUPs 10 176 IPR014729 -
Sed08g1783 763 Coils Coil 376 428 - -
Sed08g1783 763 MobiDBLite consensus disorder prediction 719 763 - -
Sed08g1783 763 PANTHER OS02G0152300 PROTEIN 14 736 IPR051348 -
Sed08g1783 763 SUPERFAMILY Protein kinase-like (PK-like) 433 709 IPR011009 -
Sed08g1783 763 MobiDBLite consensus disorder prediction 250 278 - -
Sed08g1783 763 MobiDBLite consensus disorder prediction 191 278 - -
Sed08g1783 763 ProSitePatterns Serine/Threonine protein kinases active-site signature. 568 580 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed08g1783 763 Gene3D Transferase(Phosphotransferase) domain 1 523 730 - -
Sed08g1783 763 SMART serkin_6 450 713 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed08g1783 763 Pfam Protein tyrosine and serine/threonine kinase 455 708 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed08g1783 763 ProSiteProfiles Protein kinase domain profile. 450 713 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed08g1783 763 FunFam U-box domain-containing protein 51 523 723 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed08g1781 Sed-Chr8:32600125 Sed08g1783 Sed-Chr8:32600125 0.00E+00 dispersed
Sed08g1783 Sed-Chr8:32600125 Sed11g0867 Sed-Chr11:21157119 0.00E+00 dispersed
Sed08g1782 Sed-Chr8:32600125 Sed08g1783 Sed-Chr8:32600125 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79649 PF07714 PK_Tyr_Ser-Thr 8.60E-42 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed08g1783 - - - 0.0