Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed08g1856 ATGGGTGGCGGTGGTGGCGGTGGCGCACAAAGTCGAGAGTTAGATCAAACTCCGACATGGGCTGTTGCTGCTGTTTGTGCGGTTATTATTCTTATTTCGATCATATTAGAAAATGTTCTTCATAGGTTTGGAGAGATATTTCAAAAAAGAAAAAAGAAAGCATTGTATGATGCACTCGAGAAAGTTAAAGGCGAGCTTATGGTTTTAGGATTCATTTCTTTGCTTTTGACATTTGGACAAAGTTATATTGCTCAAGTTTGCATACCTTCAAAGTATGCAAATACAATGTTGCCTTGCCCTTACAGAGGGAAGTTTCCTAAAAACACCCACGGGATCGAGCCCGAGGGGAAAGAAGACGAGCACGAAGATCACCATCGTAGGCTTCTTTGGAATGAACATCGACGTCTTGGTGGCGGTGCTCCCGTGGAAGGTTGCAAACCAGGGTATACGCAACTTATATCTCTCAATGGTTTGCATCAAATACATATCTTCATCTTCTTTCTAGCAGTTCTCCATGTTGTATTTAGCGGCATAACAATGACGCTCGGAAGATTGAAAATTCGTGGGTGGAAGGTATGGGAAAAACAAACTGAAATAGAGCATGAGGCCATGAACGATCCTACAAGATTCAGACTTACTCACGAGACCTCGTTTGTAAGAGATCACAACAGTTTTTGGACCAAAACGCCCGTCTCCTTTTACTTTGTATGCTTTTTTAGGCAATTCTTCAGGTCGGTTAGTAGAGCTGATTACTTGTCGCTTAGACATGGTTTTGTCACCGTTCATTTAGCTCCCGGGAGTAAATTTGACTTTCAAAAGTACATCAAAAGGTCATTAGAAGATGACTTCAAGGTGGTTGTCGGAATCAGTCCTTTACTATGGGCTTCAATGGTGCTTTTTCTGCTTCTCAATGTTAGTGGGTGGCAAGTTATGTTTTGGGTGTCCATGTTGCCACTTGTGGTGATATTGGCTGTTGGGACAAAGCTGCAAGGAATTATAACGCAAATGGCTTTGGAAATAAAGGAAAGACATGCTGTGGTTCAAGGGATTCCTCTGGTTCAAGTCTCTGATAGACATTTCTGGTTCAGTTGGCCCGTTTTGGTTCTTTATCTCATCCATTATGTCCTCTTTCAGAATGCATTTGAGATTACATATTTCTTTTGGATATGGTATGAATTTGGGTTGAGATCATGCTTTCACGAAAACTTTGATCGCATTATTATCAGAGTTGCTCTTGGGGTTGGAGTCCAGATTTTGTGTAGCTACATTACACTCCCATTATATGCCCTTGTCACTCAGATGGGATCGACTATGAAGAAATCAATATTTGACGACCAAACCTCAAAAGCATTGAAGCAATGGCATAGAAGTGCTTTGAAGAAAAAGACTGAAGGGCCGGGAAAGCCCGATTCAGCGCCAACACAAACTTTAGGCGTCGGAGGAAGCCCTCCGGGGTCACCGGGTCATTCCCCGCACCATAACTATCAGCATCGATCGGGCTCTCAGCCGTTGCAGGTCGACGTTGAAGCTGACGCCCGTGGTGGTGACACGATGGCCACTGTTGATCTCCATCAACAGCAGCAAGGTTATGGCAACCGTGACTTGTTGAGCTGA 1614 43.62 MGGGGGGGAQSRELDQTPTWAVAAVCAVIILISIILENVLHRFGEIFQKRKKKALYDALEKVKGELMVLGFISLLLTFGQSYIAQVCIPSKYANTMLPCPYRGKFPKNTHGIEPEGKEDEHEDHHRRLLWNEHRRLGGGAPVEGCKPGYTQLISLNGLHQIHIFIFFLAVLHVVFSGITMTLGRLKIRGWKVWEKQTEIEHEAMNDPTRFRLTHETSFVRDHNSFWTKTPVSFYFVCFFRQFFRSVSRADYLSLRHGFVTVHLAPGSKFDFQKYIKRSLEDDFKVVVGISPLLWASMVLFLLLNVSGWQVMFWVSMLPLVVILAVGTKLQGIITQMALEIKERHAVVQGIPLVQVSDRHFWFSWPVLVLYLIHYVLFQNAFEITYFFWIWYEFGLRSCFHENFDRIIIRVALGVGVQILCSYITLPLYALVTQMGSTMKKSIFDDQTSKALKQWHRSALKKKTEGPGKPDSAPTQTLGVGGSPPGSPGHSPHHNYQHRSGSQPLQVDVEADARGGDTMATVDLHQQQQGYGNRDLLS 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 33186363 33193952 + Sed0028017.1 Sed08g1856 723632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed08g1856 537 PANTHER MLO-LIKE PROTEIN 1 5 496 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Sed08g1856 537 MobiDBLite consensus disorder prediction 520 537 - -
Sed08g1856 537 MobiDBLite consensus disorder prediction 458 537 - -
Sed08g1856 537 Pfam Mlo family 12 476 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed08g1856 Sed-Chr8:33186363 Sed10g0516 Sed-Chr10:3360296 9.70E-171 dispersed
Sed08g1856 Sed-Chr8:33186363 Sed14g1259 Sed-Chr14:21668597 3.80E-175 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed08g1856 K08472 - csv:101208890 870.152