Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed08g2131 ATGTCTTTAGAGCACGAGTTTTTGTTCCTTCCCTCGTCGGGGTTCGCCTCGACGATGGGGAACCTCAACTTCCTCTTCTGTTTCCTTCTCTTTGTTGTCGTTTTCGGCCTTTGCCTTAGCCCGGGCGGTCTAGCCTGGGCTCTCGTTTCGCGGCCGAGAAACAAACCCATCATTCCTGGCCCTTGTGGCACCCCTTTTTTAGGTCAAGTTTCAACCTTTACTTCATCCCTCACTCATAGAGCTCTCGCAAAGCTCGCTCAGACCTTAAAGGCGAAACCTTTAATGTCATTCTCTGTTGGGTTCACTCGTTTTGTCATTTCTAGCAACCCCGTCACTGCAAAAGAGCTCTTGAACAGCTCGGCTTTCGCCGACCGACCGATCAAAGAGTCGGCTTATGAGCTTTTGTTTCATAGGGCAATGGGGTTTGCTCCTTATGGAGAGTATTGGAGGAACCTTAGGAGAATCTCTTCCACTCATTTGTTTAGTCCCAAAAGAATTGCAAGTTTTGGGAAGTTGAGAGAGAGAATTGGGGTTGAAATGGTGGAAGAAATCAAGGGTTTGATGGGGAAAAATGGGGAAGTTGAAGTGAGGAAAGTTTTGCATTTTGGGTCATTGAATAATGTGATGGGGAGTGTTTTTGGGAAAAGTAGTTATGGGTTTGGTAGTGAAAGTGAGCTCGAGGGATTGGTGAGTGAAGGGTATGATTTGCTTGGGAGTTTCAATTGGAGTGATCACTTTCCTATTTTGGGTTGGTTGGATTTGCAAGGAGTGAGAAAAAGGTGCAAACTTTTGGTGGGGAAAGTGAATGTTTTTGTTGGGAAAATCATAGAAGAGCATAGAATGAATAGGAGGATTATTGAAGAAATTAATCAAGAAGGGCCAATTAATATTGTTCATGATCATAATGAAGATGGGGATTTTGTTGATGTGTTGCTTGATTTGGAAAAGGAAAACAAACTCACTGACTCTGATATGATTGCTGTGTTATGGGAGATGATCTTTAGAGGAACGGACACAGTGGCAATTCTCCTAGAATGGATTCTAGCAAGGATGGTTCTTCATCCCGACATCCAAACAAAGCTCCAAACCGAAATAGACCGAGTCGTCAAAACCGACCGAACCATTTCCGATTCAGACCTCCCAAACCTCCCTTATCTCCACGCAGTGGTCAAAGAGACTCTAAGAATGCATCCTCCTGGCCCACTCCTCTCGTGGGCCCGTCTCGCCATCCACGACACCCACGTCGGCGGCCACTTCATTCCAGCCGGTACAACGGCCATGGTCAACATGTGGGCCATAACCCACGACGACCAAGTCTGGCCCGACCCAACCGCATTCAAACCGGAACGGTTCATGAAAGATAATGTGGCCATAATGGGCTCAGATCTGCGGCTGGCACCCTTCGGGTCCGGAAGAAGGGTGTGCCCTGGCAAGGCCATGGGCCTTGCCACGGTTGAGCTTTGGCTTGCGCAATTGGTTCAAAGGTTCGAGTGGGTTCACGGGTCTGAAAATGGGGTGGACTTGTCTGAGTGTTTGAAGCTGTCATTGGAAATGAAACAGCCCTTGATCTGTAGGGCTGTTCCTAGAGCTGTGGGGTTGGAGTCTCAGCCATGA 1614 47.71 MSLEHEFLFLPSSGFASTMGNLNFLFCFLLFVVVFGLCLSPGGLAWALVSRPRNKPIIPGPCGTPFLGQVSTFTSSLTHRALAKLAQTLKAKPLMSFSVGFTRFVISSNPVTAKELLNSSAFADRPIKESAYELLFHRAMGFAPYGEYWRNLRRISSTHLFSPKRIASFGKLRERIGVEMVEEIKGLMGKNGEVEVRKVLHFGSLNNVMGSVFGKSSYGFGSESELEGLVSEGYDLLGSFNWSDHFPILGWLDLQGVRKRCKLLVGKVNVFVGKIIEEHRMNRRIIEEINQEGPINIVHDHNEDGDFVDVLLDLEKENKLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQTKLQTEIDRVVKTDRTISDSDLPNLPYLHAVVKETLRMHPPGPLLSWARLAIHDTHVGGHFIPAGTTAMVNMWAITHDDQVWPDPTAFKPERFMKDNVAIMGSDLRLAPFGSGRRVCPGKAMGLATVELWLAQLVQRFEWVHGSENGVDLSECLKLSLEMKQPLICRAVPRAVGLESQP 537
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 35279533 35282273 + Sed0007733.1 Sed08g2131 723907
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed08g2131 537 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g2131 537 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g2131 537 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g2131 537 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g2131 537 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g2131 537 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g2131 537 Gene3D Cytochrome P450 47 527 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g2131 537 SUPERFAMILY Cytochrome P450 58 529 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g2131 537 FunFam Cytochrome P450 78A5 50 529 - -
Sed08g2131 537 Pfam Cytochrome P450 59 513 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g2131 537 CDD CYP78 90 522 - -
Sed08g2131 537 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g2131 537 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g2131 537 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed08g2131 537 PANTHER CYTOCHROME P450 78A7-RELATED 24 526 IPR051996 -
Sed08g2131 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g2560 Sed-Chr3:40912196 Sed08g2131 Sed-Chr8:35279533 1.30E-188 dispersed
Sed06g1750 Sed-Chr6:42217602 Sed08g2131 Sed-Chr8:35279533 2.40E-155 dispersed
Sed08g2131 Sed-Chr8:35279533 Sed09g0579 Sed-Chr9:6589623 1.00E-135 dispersed
Sed04g2295 Sed-Chr4:36627529 Sed08g2131 Sed-Chr8:35279533 2.10E-138 transposed
Sed05g3831 Sed-Chr5:45918827 Sed08g2131 Sed-Chr8:35279533 5.80E-136 transposed
Sed01g2286 Sed-Chr1:17299618 Sed08g2131 Sed-Chr8:35279533 3.80E-284 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed08g2131 K20619 - csv:101203458 847.425