Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sed08g2326 | ATGGCATCCTATTGGTGGAAAAGCTTCGACGACGATGAAGATCGGCCGGAGAAGCCTCGCCGATGCGGAGTTACAGAGATGCGAGGCCCCCATTACACTCTCTCCAGCCAAAACGCCATTCAGGAAATTTTCGAGTCTATGGGTCAATTTGTGGATGGGCTGAAGTTTTCCGGGGGTTCACATAGCTTGTTGTCGAGGGATTTTGTGAAGGGGGTGACGGAAATGGCTCATCGACATGATATCTATGTCAGTACGGGTGATTGGGCGGAGCATTTGCTTCGCAAAGGTCCATCAGGTTTTAAAGAGTATGTGGAGGAATGTAAGCTCTTGGGATTTGATACTATTGAACTGAACGTGGGGTCGCTTGAACTTCCTGAAGAAACTCTTCTGAGATATGTGCGTTTGATTAAGAATGGTGGACTTAGGGCTAAGCCTCAATTTGCTGTGAAATTCAACAAGTCTGACATTCCCATTAGTGGGAATCGAGCATTTGGAGCTTATATTGTTCCAAGACCTCGATCTTCTGACCTTGTAGAGGATGTTGATCTTCTGATCAGAAGGGCTGAGAGATGCCTAGAAGCAGGGGCAGACATGATAATGATCGATGCAGATGGTGTTAGTAAGCATGCTGATTTTCTTCGAGCAGACATTATCGCCAAAATAATTGGCCGTCTCGGTCTAGAGAAAACGATGTTTGAAGCATCGAATCCCAGAATGTCAGAGTGGTTTATCAATCATTACGGCTCAAAGGTGAATCTCTTTGTGGATCACTCTCAAGTCATGGATCTGGAGTGCCTCCGGGGCCGCAACCTGGGTAAAAATCACTCATCTGTTCTTGGTACCTCTTACTTTTGGATTTAA | 861 | 45.88 | MASYWWKSFDDDEDRPEKPRRCGVTEMRGPHYTLSSQNAIQEIFESMGQFVDGLKFSGGSHSLLSRDFVKGVTEMAHRHDIYVSTGDWAEHLLRKGPSGFKEYVEECKLLGFDTIELNVGSLELPEETLLRYVRLIKNGGLRAKPQFAVKFNKSDIPISGNRAFGAYIVPRPRSSDLVEDVDLLIRRAERCLEAGADMIMIDADGVSKHADFLRADIIAKIIGRLGLEKTMFEASNPRMSEWFINHYGSKVNLFVDHSQVMDLECLRGRNLGKNHSSVLGTSYFWI | 286 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 36647778 | 36650068 | - | Sed0013464.1 | Sed08g2326 | 724102 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sed08g2326 | 286 | Gene3D | Aldolase class I | 9 | 274 | IPR013785 | - | |
| Sed08g2326 | 286 | PANTHER | - | 3 | 285 | IPR052597 | - | |
| Sed08g2326 | 286 | SUPERFAMILY | (2r)-phospho-3-sulfolactate synthase ComA | 12 | 267 | IPR036112 | - | |
| Sed08g2326 | 286 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Sed08g2326 | 286 | Pfam | (2R)-phospho-3-sulfolactate synthase (ComA) | 14 | 270 | IPR003830 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Sed08g2326 | Sed-Chr8:36647778 | Sed08g2327 | Sed-Chr8:36647778 | 3.30E-141 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sed08g2326 | - | - | - | 0.0 |