Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed08g2385 ATGACTTCGACTGTGGATACGGATGAGGGCTCTGAAATGAAGGGAAGTATGTGGGTTCTAAACCAGAAGCTTGATCAGCCTATGGATGAAGAAGCTGGGAGGCTGAGTAATATGTACACAGAAAAGAAATTCTCGGTATTGTTGCTTCTTCGACTTGCATATCAAAGCCTTGGAGTGGTTTATGGAGATTTGGGGACTTCTCCCCTGTACGTTTTTTACAATATATTTCCTCATGGAATTTCTGATACGGAGGATGTAGTTGGAGCACTATCATTGATTATATACTCTCTCACTCTCATTCCCCTCATAAAGTATGTGTTTATCGTGTGTAAAGCAAATGACAATGGTCAAGGTGGAACATTTGCTCTCTACTCCTTGCTATGTCGACATGCAAAAGTAAAAACTATTCCGAACCAACATCGAACTGATGAGGAGCTAACAACATATAGCCGCTCTAAATTTCATGAGCAATCATTTGCTGCTAAAACAAAAAGATGGCTTGAAAGTGGCTCATCTAGGAAGAATGTGTTGCTCATTCTTGTCCTTGTTGGAACTTCTATGGTGGTTGGAGATGGAATTCTTACCCCTGCAATATCGGTTTTATCTGCTGCGGGAGGAATCAAAGTAAACCAGCCTCATGTGAGCAGTGATGTTGTTGTGCTTGTTGCTGTTGTGATACTAGTGGGATTATTCAGTGTGCAACGCTATGGTACTGATAGAGTTGGTTGGCTCTTTGCTCCAGTTGTGTTACTTTGGTTTCTATTAATTGGAGGTATAGGCATGTTCAACATCTTGAAATACGATAAGACCATTCTAAGAGCCTTTTCACCTGTGTATATTTACCGCTATTTTAGAAGGCGAGGGATAGATAGCTGGACGTCCCTCGGGGGTGTTCTGCTGAGTATAACAGGCACAGAGGCTTTATTTGCAGATTTGGCTCATTTTCGCGTAGCAGCTATACAGATTGCTTTTACCGTAGTTGTTTTTCCTTGCCTTCTCTTGGCATATTCTGGACAGGCTGCCTACCTTATGAACAATAAGGAGCATGTGGGTGATGTCTTCTATCGCTCAATCCCAGAGTCCATTTATTGGCCAGTGTTTATTGTTGCTACTGCAGCAGCTATAGTTGCTAGTCAAGCCACTATATCTGCAACATTTTCGGTAATCAAGCAAGCGCTTGCCCATGGCTGTTTTCCAAGGGTTAAAGTCGTTCATACCTCAAAGAACTTTCTTGGTCAAATATATGTTCCAGATATTAACTGGATCCTCATGGTTCTATGCATTGCTGTGACAGCAGGATTTAAGAATCAAAGTCAAATTGGAAATGCTTATGGGACCGCCGTGGTGGTAGTCATGCTAGTGACCACACTGCTCATGATTCTAATCATGATCTTGGTGTGGCGCTGTCACTGGGTCATCGCCCTGATTTTCACCGGATTGTCACTAGTCGTCGAGTGCAGTTACTTTTCTGCTGTTCTCTTCAAAGTTGATCAAGGTGGCTGGGTCCCCCTTGTAATTGCTGCAGCCTTTCTTATCATCATGTATGTGTGGCATTACGGTACTGTCAAACGATATGAATTTGAGCTGCACAGCAAAGTTTCAATGGCATGGGTTCTTGGGCTTGGTCCCAGTCTAGGATTAGTCCGTGTTCCTGGAATTGGACTTGTGTATACCGAGCTAGCAAGCGGGGTACCACACATATTCTCCCATTTCATTACGAATCTTCCTGCCATCCATTCTGTTGTTGTGTTCGTCTGTGTGAAATACCTTCCAGTCTACACCGTGCCAGTGGAAGAAAGGTTCCTGGTAAAGCGGATAGGACCAAAGAATTTCCACATGTTTCGTTGTGTTGCGAGATATGGTTATAAAGACCTCCACAAAAAGGATGATGATCTTGAGAAAAAGCTTTTTGAAAGCATCTTCCTCTTTGTCAGGCTAGAATCCATGATGGAAGGTTGTTCAGACTCTGATGAATACAGTTTGTATGGCCAGCAAACTGAGCATTCAAGGGATGGCCTATTGATTACCAACAATGGAAATGCAACTTCATCCAATTTGGACATGACTTTCTCATCAGTTGACTCAATTGTGCCCGTTAGATCTCCGTTGCGTTCGAATAACACAGTACGATCATCTGAACAAGCAAGCAATCATACCGATAGCGACGAGATCGAATTCTTGATTAGGTGTAGAGACGCTGGGGTTGTGCACATATTGGGGAACACGGTAATTAGGGCGAGAAGAGAATCAAAATTCTACAAGAAGATAGCTGTTGATTACGTATATGCTTTTCTTAGGAAGATTTGCAGGGAGAACAGTGTGATTTTCAATGTTCCTCACGAGAGTCTATTAAACGTTGGCCAAATTTTCTATGTATAG 2379 42.62 MTSTVDTDEGSEMKGSMWVLNQKLDQPMDEEAGRLSNMYTEKKFSVLLLLRLAYQSLGVVYGDLGTSPLYVFYNIFPHGISDTEDVVGALSLIIYSLTLIPLIKYVFIVCKANDNGQGGTFALYSLLCRHAKVKTIPNQHRTDEELTTYSRSKFHEQSFAAKTKRWLESGSSRKNVLLILVLVGTSMVVGDGILTPAISVLSAAGGIKVNQPHVSSDVVVLVAVVILVGLFSVQRYGTDRVGWLFAPVVLLWFLLIGGIGMFNILKYDKTILRAFSPVYIYRYFRRRGIDSWTSLGGVLLSITGTEALFADLAHFRVAAIQIAFTVVVFPCLLLAYSGQAAYLMNNKEHVGDVFYRSIPESIYWPVFIVATAAAIVASQATISATFSVIKQALAHGCFPRVKVVHTSKNFLGQIYVPDINWILMVLCIAVTAGFKNQSQIGNAYGTAVVVVMLVTTLLMILIMILVWRCHWVIALIFTGLSLVVECSYFSAVLFKVDQGGWVPLVIAAAFLIIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPVEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDDDLEKKLFESIFLFVRLESMMEGCSDSDEYSLYGQQTEHSRDGLLITNNGNATSSNLDMTFSSVDSIVPVRSPLRSNNTVRSSEQASNHTDSDEIEFLIRCRDAGVVHILGNTVIRARRESKFYKKIAVDYVYAFLRKICRENSVIFNVPHESLLNVGQIFYV 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 37045473 37051218 + Sed0013581.2 Sed08g2385 724161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed08g2385 792 NCBIfam potassium uptake protein 52 791 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Sed08g2385 792 Pfam K+ potassium transporter C-terminal domain 551 789 IPR053952 -
Sed08g2385 792 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 45 791 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Sed08g2385 792 Pfam K+ potassium transporter integral membrane domain 52 537 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g1524 Sed-Chr1:11011007 Sed08g2385 Sed-Chr8:37045473 0.00E+00 dispersed
Sed08g2385 Sed-Chr8:37045473 Sed10g1497 Sed-Chr10:31416105 5.40E-210 dispersed
Sed08g2385 Sed-Chr8:37045473 Sed08g2386 Sed-Chr8:37046425 0.00E+00 tandem
Sed01g1523 Sed-Chr1:11011007 Sed08g2385 Sed-Chr8:37045473 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed08g2385 K03549 - csv:101217915 1422.91