Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed08g2577 ATGGGTTCACTTTATATGAGCAATAAACCTGTTTTAAAAGTTGATAGCAAGAACTGGTCAGCAACTTCACTTATTTCGAAGATAAAGAAACTTGCAGAGAGAAGAAATTCAACAGATCTAACAATTGGCCCAGTCCTTACATTCACTAATGAAATGGTACTTGATCATATGAATAAGTTACTCAAGATACCAGGGGCAAAATTGCTCTTTGGAGGTGAACCTCTTAAAAACCATTCCATTCCACCGATATACGCCGCTACAGAACCGACCATAGTATATGTTCCACTTGAAGAAATGATGAAAAGCGACAATTATGAGCTCGTGACTAAAGAAATTTTTGGACCTTTCCAGGTTATTACTGAATATAAGAAAGATCAACTTTCAATTGTGTTGGATGCTCTAGAGCGGATGCATGCTCATCTAACAGCAGCTGTTGTTTCAAATGACCCAATTTTTTTACTGAAAGTTATTGGCAATACAGTTAACAGAACGACATATGCTCGTTTACGAGCGAGAACAACTGGAGCTCAACAGAACCATTGA 543 37.57 MGSLYMSNKPVLKVDSKNWSATSLISKIKKLAERRNSTDLTIGPVLTFTNEMVLDHMNKLLKIPGAKLLFGGEPLKNHSIPPIYAATEPTIVYVPLEEMMKSDNYELVTKEIFGPFQVITEYKKDQLSIVLDALERMHAHLTAAVVSNDPIFLLKVIGNTVNRTTYARLRARTTGAQQNH 180
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 38249675 38252898 - Sed0026511.2 Sed08g2577 724353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed08g2577 180 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 16 166 IPR016163 GO:0016620(InterPro)
Sed08g2577 180 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 22 179 IPR044638 GO:0003842(PANTHER)|GO:0004029(InterPro)|GO:0005739(PANTHER)|GO:0010133(PANTHER)
Sed08g2577 180 Pfam Aldehyde dehydrogenase family 26 154 IPR015590 GO:0016491(InterPro)
Sed08g2577 180 SUPERFAMILY ALDH-like 36 158 IPR016161 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g1829 Sed-Chr1:13458729 Sed08g2577 Sed-Chr8:38249675 1.30E-74 dispersed
Sed08g2576 Sed-Chr8:38249675 Sed08g2577 Sed-Chr8:38249675 7.40E-99 tandem
Sed08g2577 Sed-Chr8:38249675 Sed08g2578 Sed-Chr8:38249675 8.80E-84 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed08g2577 K00294 - csv:101214440 276.944