Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed08g2578 ATGGGTTCACTTTATATGAGCAATAAACCTGTTTTAAAAGTTGATAGCAAGAACTGGTCAGCAACTTCACTTATTTCGAAGATAAAGAAACTTGCAGAGAGAAGAAATTCAACAGATCTAACAATTGGCCCAGTCCTTACATTCACTAATGAAATGGTACTTGATCATATGAATAAGTTACTCAAGATACCAGGGGCAAAATTGCTCTTTGGAGGTGAACCTCTTAAAAACCATTCCATTCCACCGATATACGCCGCTACAGAACCGACCATAGTATATGTTCCACTTGAAGAAATGATGAAAAGCGACAATTATGAGCTCGTGACTAAAGAAATTTTTGGACCTTTCCAGGTTATTACTGAATATAAGAAAGATCAACTTTCAATTGTGTTGGATGCTCTAGAGCGGATGCATGCTCATCTAACAGCAGCTGTTGTTTCAAATGACCCAATTTTTTTACTGGTGAGTTGA 471 37.15 MGSLYMSNKPVLKVDSKNWSATSLISKIKKLAERRNSTDLTIGPVLTFTNEMVLDHMNKLLKIPGAKLLFGGEPLKNHSIPPIYAATEPTIVYVPLEEMMKSDNYELVTKEIFGPFQVITEYKKDQLSIVLDALERMHAHLTAAVVSNDPIFLLVS 156
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 38249675 38252898 - Sed0026511.3 Sed08g2578 724354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed08g2578 156 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 16 153 IPR016163 GO:0016620(InterPro)
Sed08g2578 156 Pfam Aldehyde dehydrogenase family 26 149 IPR015590 GO:0016491(InterPro)
Sed08g2578 156 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 22 152 IPR044638 GO:0003842(PANTHER)|GO:0004029(InterPro)|GO:0005739(PANTHER)|GO:0010133(PANTHER)
Sed08g2578 156 SUPERFAMILY ALDH-like 35 150 IPR016161 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed08g2576 Sed-Chr8:38249675 Sed08g2578 Sed-Chr8:38249675 8.80E-84 dispersed
Sed08g2577 Sed-Chr8:38249675 Sed08g2578 Sed-Chr8:38249675 8.80E-84 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed08g2578 K00294 - csv:101214440 241.121