Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed08g2751 ATGCTTCGTCATCCGAATATCGTCGAAATAAAACATATCATGCTTCCTCCCTCACAACGAGAATTCAAAGATATATATATTGTTTTTGAGTTGATGAAGTCTGACCTTCATAACGTAATTAAGACAAATAATGTTCTTTCTCCCAAGCAGCTTAAATATTTCTTACACCAGCTTCTTTGTGGCCTAAGATATATACATGCAGCAAATGTTCTTCATCGTGATTTGAAGCCAAAAAACATCCTTGCTAATACTGACTGCAGACTGAAGATATGTGATTTTGGACTTGCTCGTGTATCCTTTAATGACGCGCCATCTAATATTTTCTGGACAGATTATGTTGCAACTCGGTGGTATCGTGCTCCCGAACTCTGTGGATCATTTTTCTCGAGATATACCCCTGCTATAGATATTTGGAGTATCGGATGCATATTTGCAGAAATGCTATCGGGAAAACCTTTGTTTCCTGGAAAAAATGTGGTTCACCAATTAGATCTAATTACAGATCTGTTTGGCACTCCAGATGATGAATCCATAGCGAAGATTCGGAATGAGAAAGCAAGAAGGTATCTTGGAAACATGCGTAAAAAACCCCCACTTCCATTCTCACGAAAGTTTCCTAATGTTGACCCATTGGCACTTCGTTTACTGGAACGTCTTCTGGCATTTGATCCCAAATGCCGTCTAACTGCTGCAGAGGCACTTGCTGATCCTTACTTCACTGATATGAGGAGAGCAGAACTTGAACCTTCTATTCAACCAATTTCAAAACTTGAGTTTGAGTTTGAGAGGAGGAGATTAACCAAAGAGGATGTTAGAGAGTTAATTTATGCAGAGATTTTAGAGTATCATCCCCAAATGCGTAGACGCGATGGAGATCAAACTAACTTTATGTATCCAAGTGGCGTTGATCGATTTAAGCTTCAGTTTGCACATCTGGAAGAGAACCCTAGTAAAGGACAAAGAAATGCTGTACTTCAAAGGCAGAACGTTTCTTTACCTCGGGAACGGGTTAATCAACCCGAGCGCAAGAACGCTGAGCATAACCATGATGTTGGAACGGGAAATGAGAAGAGTGCTCACCTCTTGAAAAGTGCTAGCATTAGTGCATCGAGGTGTCTTGGGGTGGTACCAAAGGAGAAGTCCGAGGTGGAAAGTACAAGTTCTGAGATGCAAAATGAAGCAGTTGATGGAGTGACTCAAAGGATTGCAAATCTTCAGACTTGA 1224 40.77 MLRHPNIVEIKHIMLPPSQREFKDIYIVFELMKSDLHNVIKTNNVLSPKQLKYFLHQLLCGLRYIHAANVLHRDLKPKNILANTDCRLKICDFGLARVSFNDAPSNIFWTDYVATRWYRAPELCGSFFSRYTPAIDIWSIGCIFAEMLSGKPLFPGKNVVHQLDLITDLFGTPDDESIAKIRNEKARRYLGNMRKKPPLPFSRKFPNVDPLALRLLERLLAFDPKCRLTAAEALADPYFTDMRRAELEPSIQPISKLEFEFERRRLTKEDVRELIYAEILEYHPQMRRRDGDQTNFMYPSGVDRFKLQFAHLEENPSKGQRNAVLQRQNVSLPRERVNQPERKNAEHNHDVGTGNEKSAHLLKSASISASRCLGVVPKEKSEVESTSSEMQNEAVDGVTQRIANLQT 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 39187253 39193928 - Sed0000901.1 Sed08g2751 724527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed08g2751 407 MobiDBLite consensus disorder prediction 316 356 - -
Sed08g2751 407 Gene3D Phosphorylase Kinase; domain 1 1 285 - -
Sed08g2751 407 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 2 280 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Sed08g2751 407 MobiDBLite consensus disorder prediction 379 398 - -
Sed08g2751 407 MobiDBLite consensus disorder prediction 319 335 - -
Sed08g2751 407 SMART serkin_6 1 239 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed08g2751 407 MobiDBLite consensus disorder prediction 336 356 - -
Sed08g2751 407 ProSiteProfiles Protein kinase domain profile. 1 239 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed08g2751 407 Pfam Protein kinase domain 2 239 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed08g2751 407 Gene3D Transferase(Phosphotransferase) domain 1 34 262 - -
Sed08g2751 407 FunFam Mitogen-activated protein kinase 34 262 - -
Sed08g2751 407 SUPERFAMILY Protein kinase-like (PK-like) 2 244 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed08g2751 Sed-Chr8:39187253 Sed13g0648 Sed-Chr13:4381399 2.40E-129 dispersed
Sed01g1760 Sed-Chr1:12815884 Sed08g2751 Sed-Chr8:39187253 5.50E-192 wgd
Sed12g2110 Sed-Chr12:31783363 Sed08g2751 Sed-Chr8:39187253 5.50E-163 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79725 PF00069 Pkinase 2.20E-52 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed08g2751 - - - 0.0